Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 AC116351.2-201ENST00000606540 1585 ntBASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 AP006587.1-201ENST00000534129 1502 ntBASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 TFP1-202ENST00000475455 1573 ntBASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.91■□□□□ 0.46
RNFT1Q5M7Z0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 AC079598.2-202ENST00000546624 1451 ntBASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 AC018553.1-201ENST00000616682 1458 ntBASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 NIFKP9-201ENST00000419265 221 ntBASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 RBM17P1-201ENST00000453646 1190 ntBASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 CR392000.1-201ENST00000624770 1228 ntBASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
RNFT1Q5M7Z0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
RNFT1Q5M7Z0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RNFT1Q5M7Z0 KRT16P6-202ENST00000425692 1426 ntBASIC17.89■□□□□ 0.46
RNFT1Q5M7Z0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
RNFT1Q5M7Z0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.89■□□□□ 0.46
RNFT1Q5M7Z0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNFT1Q5M7Z0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNFT1Q5M7Z0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RNFT1Q5M7Z0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.89■□□□□ 0.45
RNFT1Q5M7Z0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.89■□□□□ 0.45
RNFT1Q5M7Z0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.89■□□□□ 0.45
RNFT1Q5M7Z0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.89■□□□□ 0.45
RNFT1Q5M7Z0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
RNFT1Q5M7Z0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNFT1Q5M7Z0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNFT1Q5M7Z0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNFT1Q5M7Z0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.89■□□□□ 0.45
RNFT1Q5M7Z0 KRT8P9-201ENST00000558927 1449 ntBASIC17.89■□□□□ 0.45
RNFT1Q5M7Z0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNFT1Q5M7Z0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNFT1Q5M7Z0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNFT1Q5M7Z0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.88■□□□□ 0.45
RNFT1Q5M7Z0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNFT1Q5M7Z0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNFT1Q5M7Z0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNFT1Q5M7Z0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.88■□□□□ 0.45
RNFT1Q5M7Z0 MMP23A-201ENST00000234610 1017 ntBASIC17.88■□□□□ 0.45
RNFT1Q5M7Z0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
RNFT1Q5M7Z0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.88■□□□□ 0.45
RNFT1Q5M7Z0 KSR1P1-201ENST00000446298 240 ntBASIC17.88■□□□□ 0.45
RNFT1Q5M7Z0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNFT1Q5M7Z0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.88■□□□□ 0.45
RNFT1Q5M7Z0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.88■□□□□ 0.45
RNFT1Q5M7Z0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.88■□□□□ 0.45
RNFT1Q5M7Z0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RNFT1Q5M7Z0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms