Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM71Q2Q1W2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TRIM71Q2Q1W2 AC104076.2-201ENST00000448912 469 ntBASIC21.73■■□□□ 1.07
TRIM71Q2Q1W2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIM71Q2Q1W2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIM71Q2Q1W2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.73■■□□□ 1.07
TRIM71Q2Q1W2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM71Q2Q1W2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
TRIM71Q2Q1W2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM71Q2Q1W2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.73■■□□□ 1.07
TRIM71Q2Q1W2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM71Q2Q1W2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM71Q2Q1W2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.72■■□□□ 1.07
TRIM71Q2Q1W2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM71Q2Q1W2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.72■■□□□ 1.07
TRIM71Q2Q1W2 AC018553.1-201ENST00000616682 1458 ntBASIC21.72■■□□□ 1.07
TRIM71Q2Q1W2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM71Q2Q1W2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
TRIM71Q2Q1W2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM71Q2Q1W2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TRIM71Q2Q1W2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM71Q2Q1W2 YBX1P10-201ENST00000444752 975 ntBASIC21.72■■□□□ 1.07
TRIM71Q2Q1W2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM71Q2Q1W2 AC010203.1-204ENST00000548782 407 ntBASIC21.72■■□□□ 1.07
TRIM71Q2Q1W2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM71Q2Q1W2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM71Q2Q1W2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM71Q2Q1W2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM71Q2Q1W2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM71Q2Q1W2 AC133561.1-201ENST00000568600 2415 ntBASIC21.71■■□□□ 1.07
TRIM71Q2Q1W2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.71■■□□□ 1.07
TRIM71Q2Q1W2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.71■■□□□ 1.07
TRIM71Q2Q1W2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM71Q2Q1W2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM71Q2Q1W2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM71Q2Q1W2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM71Q2Q1W2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM71Q2Q1W2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.71■■□□□ 1.07
TRIM71Q2Q1W2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM71Q2Q1W2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TRIM71Q2Q1W2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM71Q2Q1W2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM71Q2Q1W2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TRIM71Q2Q1W2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM71Q2Q1W2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM71Q2Q1W2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM71Q2Q1W2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM71Q2Q1W2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 DUX4L26-201ENST00000489078 1255 ntBASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 DGCR10-201ENST00000609839 495 ntBASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM71Q2Q1W2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM71Q2Q1W2 AC006128.1-201ENST00000624704 1661 ntBASIC21.69■■□□□ 1.06
TRIM71Q2Q1W2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TRIM71Q2Q1W2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM71Q2Q1W2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM71Q2Q1W2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM71Q2Q1W2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM71Q2Q1W2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.69■■□□□ 1.06
TRIM71Q2Q1W2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM71Q2Q1W2 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM71Q2Q1W2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM71Q2Q1W2 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM71Q2Q1W2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
TRIM71Q2Q1W2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM71Q2Q1W2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM71Q2Q1W2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM71Q2Q1W2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.68■■□□□ 1.06
TRIM71Q2Q1W2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
TRIM71Q2Q1W2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM71Q2Q1W2 TSPY14P-201ENST00000303979 915 ntBASIC21.68■■□□□ 1.06
TRIM71Q2Q1W2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM71Q2Q1W2 EGLN1P1-201ENST00000531623 762 ntBASIC21.68■■□□□ 1.06
TRIM71Q2Q1W2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.68■■□□□ 1.06
TRIM71Q2Q1W2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.68■■□□□ 1.06
TRIM71Q2Q1W2 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.68■■□□□ 1.06
TRIM71Q2Q1W2 KRT16P6-202ENST00000425692 1426 ntBASIC21.68■■□□□ 1.06
TRIM71Q2Q1W2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms