Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
NKX6-1P78426 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX6-1P78426 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.45■□□□□ 0.38
NKX6-1P78426 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX6-1P78426 AP001412.1-201ENST00000608405 714 ntBASIC17.45■□□□□ 0.38
NKX6-1P78426 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX6-1P78426 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX6-1P78426 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX6-1P78426 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX6-1P78426 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
NKX6-1P78426 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX6-1P78426 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
NKX6-1P78426 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NKX6-1P78426 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
NKX6-1P78426 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX6-1P78426 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX6-1P78426 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX6-1P78426 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.44■□□□□ 0.38
NKX6-1P78426 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NKX6-1P78426 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NKX6-1P78426 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NKX6-1P78426 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX6-1P78426 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX6-1P78426 TSPY7P-201ENST00000431358 1114 ntBASIC17.44■□□□□ 0.38
NKX6-1P78426 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.44■□□□□ 0.38
NKX6-1P78426 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX6-1P78426 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.44■□□□□ 0.38
NKX6-1P78426 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
NKX6-1P78426 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX6-1P78426 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.44■□□□□ 0.38
NKX6-1P78426 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.44■□□□□ 0.38
NKX6-1P78426 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX6-1P78426 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX6-1P78426 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX6-1P78426 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.44■□□□□ 0.38
NKX6-1P78426 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX6-1P78426 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.44■□□□□ 0.38
NKX6-1P78426 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NKX6-1P78426 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NKX6-1P78426 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
NKX6-1P78426 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NKX6-1P78426 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NKX6-1P78426 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.44■□□□□ 0.38
NKX6-1P78426 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
NKX6-1P78426 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.43■□□□□ 0.38
NKX6-1P78426 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX6-1P78426 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX6-1P78426 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.43■□□□□ 0.38
NKX6-1P78426 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NKX6-1P78426 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NKX6-1P78426 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.43■□□□□ 0.38
NKX6-1P78426 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.43■□□□□ 0.38
NKX6-1P78426 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.43■□□□□ 0.38
NKX6-1P78426 AC133561.5-201ENST00000635547 218 ntBASIC17.43■□□□□ 0.38
NKX6-1P78426 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NKX6-1P78426 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX6-1P78426 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX6-1P78426 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX6-1P78426 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX6-1P78426 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX6-1P78426 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX6-1P78426 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
NKX6-1P78426 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NKX6-1P78426 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NKX6-1P78426 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NKX6-1P78426 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NKX6-1P78426 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
NKX6-1P78426 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.42■□□□□ 0.38
NKX6-1P78426 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.42■□□□□ 0.38
NKX6-1P78426 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NKX6-1P78426 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NKX6-1P78426 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NKX6-1P78426 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.42■□□□□ 0.38
NKX6-1P78426 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NKX6-1P78426 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.42■□□□□ 0.38
NKX6-1P78426 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NKX6-1P78426 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NKX6-1P78426 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NKX6-1P78426 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NKX6-1P78426 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.42■□□□□ 0.38
NKX6-1P78426 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NKX6-1P78426 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
NKX6-1P78426 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NKX6-1P78426 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.41■□□□□ 0.38
NKX6-1P78426 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
NKX6-1P78426 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.41■□□□□ 0.38
NKX6-1P78426 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NKX6-1P78426 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.41■□□□□ 0.38
NKX6-1P78426 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NKX6-1P78426 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NKX6-1P78426 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NKX6-1P78426 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NKX6-1P78426 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NKX6-1P78426 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NKX6-1P78426 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NKX6-1P78426 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.41■□□□□ 0.38
NKX6-1P78426 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.41■□□□□ 0.38
NKX6-1P78426 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NKX6-1P78426 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
NKX6-1P78426 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms