Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSM6P62312 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LSM6P62312 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.43■□□□□ 0.38
LSM6P62312 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LSM6P62312 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.43■□□□□ 0.38
LSM6P62312 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LSM6P62312 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.43■□□□□ 0.38
LSM6P62312 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LSM6P62312 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LSM6P62312 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LSM6P62312 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.43■□□□□ 0.38
LSM6P62312 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
LSM6P62312 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.43■□□□□ 0.38
LSM6P62312 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LSM6P62312 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LSM6P62312 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.43■□□□□ 0.38
LSM6P62312 AC005829.2-201ENST00000571422 1056 ntBASIC17.43■□□□□ 0.38
LSM6P62312 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.43■□□□□ 0.38
LSM6P62312 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.43■□□□□ 0.38
LSM6P62312 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.43■□□□□ 0.38
LSM6P62312 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSM6P62312 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSM6P62312 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LSM6P62312 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSM6P62312 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSM6P62312 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSM6P62312 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LSM6P62312 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.43■□□□□ 0.38
LSM6P62312 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
LSM6P62312 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSM6P62312 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSM6P62312 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSM6P62312 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSM6P62312 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LSM6P62312 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSM6P62312 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.42■□□□□ 0.38
LSM6P62312 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.42■□□□□ 0.38
LSM6P62312 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
LSM6P62312 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSM6P62312 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSM6P62312 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSM6P62312 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LSM6P62312 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSM6P62312 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LSM6P62312 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
LSM6P62312 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.42■□□□□ 0.38
LSM6P62312 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.42■□□□□ 0.38
LSM6P62312 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.42■□□□□ 0.38
LSM6P62312 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.42■□□□□ 0.38
LSM6P62312 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSM6P62312 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSM6P62312 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSM6P62312 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSM6P62312 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LSM6P62312 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.42■□□□□ 0.38
LSM6P62312 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSM6P62312 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.42■□□□□ 0.38
LSM6P62312 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.42■□□□□ 0.38
LSM6P62312 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSM6P62312 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LSM6P62312 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LSM6P62312 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LSM6P62312 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LSM6P62312 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LSM6P62312 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LSM6P62312 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LSM6P62312 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LSM6P62312 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LSM6P62312 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LSM6P62312 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LSM6P62312 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LSM6P62312 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LSM6P62312 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.41■□□□□ 0.38
LSM6P62312 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
LSM6P62312 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.41■□□□□ 0.38
LSM6P62312 AC097658.1-201ENST00000475555 843 ntBASIC17.41■□□□□ 0.38
LSM6P62312 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LSM6P62312 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.41■□□□□ 0.38
LSM6P62312 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LSM6P62312 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LSM6P62312 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.41■□□□□ 0.38
LSM6P62312 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.41■□□□□ 0.38
LSM6P62312 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LSM6P62312 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LSM6P62312 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
LSM6P62312 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.41■□□□□ 0.38
LSM6P62312 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LSM6P62312 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.41■□□□□ 0.38
LSM6P62312 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LSM6P62312 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LSM6P62312 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSM6P62312 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSM6P62312 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSM6P62312 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSM6P62312 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.4■□□□□ 0.38
LSM6P62312 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
LSM6P62312 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSM6P62312 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSM6P62312 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSM6P62312 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms