Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP1S1P61966 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP1S1P61966 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP1S1P61966 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
AP1S1P61966 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
AP1S1P61966 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP1S1P61966 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.01■□□□□ 0.79
AP1S1P61966 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
AP1S1P61966 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
AP1S1P61966 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.01■□□□□ 0.79
AP1S1P61966 AL691432.2-201ENST00000607222 2038 ntBASIC20.01■□□□□ 0.79
AP1S1P61966 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP1S1P61966 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
AP1S1P61966 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.01■□□□□ 0.79
AP1S1P61966 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.01■□□□□ 0.79
AP1S1P61966 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.01■□□□□ 0.79
AP1S1P61966 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.01■□□□□ 0.79
AP1S1P61966 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
AP1S1P61966 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20■□□□□ 0.79
AP1S1P61966 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20■□□□□ 0.79
AP1S1P61966 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20■□□□□ 0.79
AP1S1P61966 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20■□□□□ 0.79
AP1S1P61966 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20■□□□□ 0.79
AP1S1P61966 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20■□□□□ 0.79
AP1S1P61966 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20■□□□□ 0.79
AP1S1P61966 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20■□□□□ 0.79
AP1S1P61966 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20■□□□□ 0.79
AP1S1P61966 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
AP1S1P61966 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP1S1P61966 TCF3P1-201ENST00000423021 1937 ntBASIC20■□□□□ 0.79
AP1S1P61966 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
AP1S1P61966 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20■□□□□ 0.79
AP1S1P61966 TFP1-202ENST00000475455 1573 ntBASIC20■□□□□ 0.79
AP1S1P61966 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
AP1S1P61966 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.99■□□□□ 0.79
AP1S1P61966 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP1S1P61966 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP1S1P61966 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AP1S1P61966 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
AP1S1P61966 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AP1S1P61966 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP1S1P61966 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.99■□□□□ 0.79
AP1S1P61966 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.99■□□□□ 0.79
AP1S1P61966 AC239809.2-201ENST00000415381 517 ntBASIC19.99■□□□□ 0.79
AP1S1P61966 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.99■□□□□ 0.79
AP1S1P61966 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.99■□□□□ 0.79
AP1S1P61966 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
AP1S1P61966 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.99■□□□□ 0.79
AP1S1P61966 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.99■□□□□ 0.79
AP1S1P61966 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP1S1P61966 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP1S1P61966 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
AP1S1P61966 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP1S1P61966 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AP1S1P61966 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AP1S1P61966 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP1S1P61966 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AP1S1P61966 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.98■□□□□ 0.79
AP1S1P61966 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP1S1P61966 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP1S1P61966 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP1S1P61966 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP1S1P61966 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP1S1P61966 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.98■□□□□ 0.79
AP1S1P61966 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.98■□□□□ 0.79
AP1S1P61966 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.98■□□□□ 0.79
AP1S1P61966 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP1S1P61966 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP1S1P61966 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP1S1P61966 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP1S1P61966 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
AP1S1P61966 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP1S1P61966 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP1S1P61966 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
AP1S1P61966 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
AP1S1P61966 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP1S1P61966 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP1S1P61966 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP1S1P61966 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
AP1S1P61966 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP1S1P61966 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP1S1P61966 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.97■□□□□ 0.79
AP1S1P61966 AC009237.14-201ENST00000609975 1594 ntBASIC19.97■□□□□ 0.79
AP1S1P61966 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
AP1S1P61966 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP1S1P61966 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP1S1P61966 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.97■□□□□ 0.79
AP1S1P61966 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.97■□□□□ 0.79
AP1S1P61966 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
AP1S1P61966 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP1S1P61966 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP1S1P61966 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP1S1P61966 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP1S1P61966 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP1S1P61966 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.97■□□□□ 0.79
AP1S1P61966 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP1S1P61966 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
AP1S1P61966 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
AP1S1P61966 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
AP1S1P61966 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms