Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ERVFC1P60507 FEM1AP4-201ENST00000443167 1987 ntBASIC20.98■□□□□ 0.95
ERVFC1P60507 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ERVFC1P60507 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
ERVFC1P60507 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ERVFC1P60507 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.98■□□□□ 0.95
ERVFC1P60507 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
ERVFC1P60507 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ERVFC1P60507 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.98■□□□□ 0.95
ERVFC1P60507 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ERVFC1P60507 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.98■□□□□ 0.95
ERVFC1P60507 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.98■□□□□ 0.95
ERVFC1P60507 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ERVFC1P60507 DPP3P2-201ENST00000416030 1696 ntBASIC20.98■□□□□ 0.95
ERVFC1P60507 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.98■□□□□ 0.95
ERVFC1P60507 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ERVFC1P60507 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.98■□□□□ 0.95
ERVFC1P60507 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERVFC1P60507 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERVFC1P60507 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ERVFC1P60507 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ERVFC1P60507 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERVFC1P60507 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.97■□□□□ 0.95
ERVFC1P60507 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERVFC1P60507 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERVFC1P60507 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERVFC1P60507 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ERVFC1P60507 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ERVFC1P60507 KRT18P16-201ENST00000510337 1294 ntBASIC20.97■□□□□ 0.95
ERVFC1P60507 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.97■□□□□ 0.95
ERVFC1P60507 FAM87A-204ENST00000613235 858 ntBASIC20.97■□□□□ 0.95
ERVFC1P60507 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ERVFC1P60507 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERVFC1P60507 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERVFC1P60507 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ERVFC1P60507 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ERVFC1P60507 FP700111.2-201ENST00000619190 1892 ntBASIC20.96■□□□□ 0.95
ERVFC1P60507 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERVFC1P60507 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.96■□□□□ 0.95
ERVFC1P60507 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERVFC1P60507 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ERVFC1P60507 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ERVFC1P60507 AC018553.1-201ENST00000616682 1458 ntBASIC20.96■□□□□ 0.95
ERVFC1P60507 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERVFC1P60507 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERVFC1P60507 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERVFC1P60507 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
ERVFC1P60507 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ERVFC1P60507 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERVFC1P60507 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERVFC1P60507 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.96■□□□□ 0.95
ERVFC1P60507 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.96■□□□□ 0.95
ERVFC1P60507 YBX1P10-201ENST00000444752 975 ntBASIC20.96■□□□□ 0.95
ERVFC1P60507 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.96■□□□□ 0.95
ERVFC1P60507 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.96■□□□□ 0.95
ERVFC1P60507 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.96■□□□□ 0.95
ERVFC1P60507 AC131212.4-201ENST00000623606 975 ntBASIC20.96■□□□□ 0.95
ERVFC1P60507 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ERVFC1P60507 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERVFC1P60507 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ERVFC1P60507 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
ERVFC1P60507 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERVFC1P60507 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERVFC1P60507 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERVFC1P60507 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERVFC1P60507 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ERVFC1P60507 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERVFC1P60507 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERVFC1P60507 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERVFC1P60507 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.95■□□□□ 0.94
ERVFC1P60507 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ERVFC1P60507 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERVFC1P60507 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERVFC1P60507 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ERVFC1P60507 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.95■□□□□ 0.94
ERVFC1P60507 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ERVFC1P60507 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.95■□□□□ 0.94
ERVFC1P60507 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERVFC1P60507 AC130371.2-201ENST00000619443 611 ntBASIC20.95■□□□□ 0.94
ERVFC1P60507 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERVFC1P60507 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERVFC1P60507 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ERVFC1P60507 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERVFC1P60507 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ERVFC1P60507 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERVFC1P60507 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.94■□□□□ 0.94
ERVFC1P60507 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERVFC1P60507 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ERVFC1P60507 AK4P3-201ENST00000418260 669 ntBASIC20.94■□□□□ 0.94
ERVFC1P60507 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.94■□□□□ 0.94
ERVFC1P60507 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.94■□□□□ 0.94
ERVFC1P60507 TUBB8P6-201ENST00000436895 1288 ntBASIC20.94■□□□□ 0.94
ERVFC1P60507 AC128688.1-201ENST00000487626 519 ntBASIC20.94■□□□□ 0.94
ERVFC1P60507 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.94■□□□□ 0.94
ERVFC1P60507 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.94■□□□□ 0.94
ERVFC1P60507 SLC25A1P4-201ENST00000567977 778 ntBASIC20.94■□□□□ 0.94
ERVFC1P60507 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.94■□□□□ 0.94
ERVFC1P60507 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ERVFC1P60507 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERVFC1P60507 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms