Protein–RNA interactions for Protein: P59037

LINC00313, Putative uncharacterized protein encoded by LINC00313, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00313P59037 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00313P59037 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00313P59037 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00313P59037 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00313P59037 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00313P59037 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00313P59037 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00313P59037 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
LINC00313P59037 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00313P59037 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
LINC00313P59037 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC00313P59037 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00313P59037 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00313P59037 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00313P59037 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00313P59037 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LINC00313P59037 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00313P59037 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00313P59037 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LINC00313P59037 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
LINC00313P59037 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00313P59037 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
LINC00313P59037 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
LINC00313P59037 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00313P59037 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00313P59037 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
LINC00313P59037 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00313P59037 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00313P59037 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00313P59037 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LINC00313P59037 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00313P59037 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00313P59037 PTPA-214ENST00000423100 988 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00313P59037 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00313P59037 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00313P59037 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00313P59037 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00313P59037 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00313P59037 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00313P59037 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC00313P59037 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC00313P59037 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00313P59037 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00313P59037 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00313P59037 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00313P59037 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00313P59037 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC11.31□□□□□ -0.6
LINC00313P59037 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00313P59037 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
LINC00313P59037 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00313P59037 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00313P59037 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00313P59037 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
LINC00313P59037 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
LINC00313P59037 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00313P59037 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00313P59037 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00313P59037 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00313P59037 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00313P59037 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00313P59037 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00313P59037 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00313P59037 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00313P59037 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00313P59037 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00313P59037 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00313P59037 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00313P59037 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00313P59037 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00313P59037 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
LINC00313P59037 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00313P59037 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LINC00313P59037 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00313P59037 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00313P59037 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC11.3□□□□□ -0.6
LINC00313P59037 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00313P59037 DUX4L2-201ENST00000561772 1275 ntBASIC11.3□□□□□ -0.6
LINC00313P59037 FAM21FP-204ENST00000608637 956 ntBASIC11.3□□□□□ -0.6
LINC00313P59037 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
LINC00313P59037 AL136967.2-201ENST00000623968 743 ntBASIC11.3□□□□□ -0.6
LINC00313P59037 DUX4L6-201ENST00000626483 1275 ntBASIC11.3□□□□□ -0.6
LINC00313P59037 DUX4L1-201ENST00000627662 1275 ntBASIC11.3□□□□□ -0.6
LINC00313P59037 DUX4L8-201ENST00000629013 1275 ntBASIC11.3□□□□□ -0.6
LINC00313P59037 DUX4L3-201ENST00000630187 1275 ntBASIC11.3□□□□□ -0.6
LINC00313P59037 DUX4L7-201ENST00000630678 1275 ntBASIC11.3□□□□□ -0.6
LINC00313P59037 DUX4L5-201ENST00000630834 1275 ntBASIC11.3□□□□□ -0.6
LINC00313P59037 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00313P59037 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
LINC00313P59037 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00313P59037 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
LINC00313P59037 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
LINC00313P59037 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00313P59037 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00313P59037 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00313P59037 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
LINC00313P59037 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00313P59037 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00313P59037 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00313P59037 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00313P59037 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms