Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB38P57729 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB38P57729 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB38P57729 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB38P57729 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RAB38P57729 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB38P57729 AP001271.2-201ENST00000624018 1556 ntBASIC18.68■□□□□ 0.58
RAB38P57729 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB38P57729 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.68■□□□□ 0.58
RAB38P57729 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB38P57729 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.68■□□□□ 0.58
RAB38P57729 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB38P57729 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB38P57729 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB38P57729 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB38P57729 AC018553.1-201ENST00000616682 1458 ntBASIC18.68■□□□□ 0.58
RAB38P57729 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB38P57729 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB38P57729 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RAB38P57729 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.68■□□□□ 0.58
RAB38P57729 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB38P57729 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB38P57729 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB38P57729 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB38P57729 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB38P57729 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB38P57729 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB38P57729 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RAB38P57729 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB38P57729 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB38P57729 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB38P57729 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB38P57729 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB38P57729 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.67■□□□□ 0.58
RAB38P57729 AC128676.1-201ENST00000454392 318 ntBASIC18.67■□□□□ 0.58
RAB38P57729 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB38P57729 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB38P57729 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.67■□□□□ 0.58
RAB38P57729 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB38P57729 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB38P57729 ITM2C-210ENST00000620962 501 ntBASIC18.67■□□□□ 0.58
RAB38P57729 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
RAB38P57729 AC073648.6-201ENST00000641589 218 ntBASIC18.67■□□□□ 0.58
RAB38P57729 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB38P57729 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB38P57729 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB38P57729 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB38P57729 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB38P57729 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB38P57729 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RAB38P57729 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB38P57729 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB38P57729 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB38P57729 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB38P57729 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB38P57729 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RAB38P57729 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB38P57729 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB38P57729 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB38P57729 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB38P57729 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB38P57729 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB38P57729 ABHD17AP1-201ENST00000358206 933 ntBASIC18.66■□□□□ 0.58
RAB38P57729 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB38P57729 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB38P57729 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB38P57729 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB38P57729 AC233263.1-201ENST00000578059 224 ntBASIC18.66■□□□□ 0.58
RAB38P57729 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.66■□□□□ 0.58
RAB38P57729 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB38P57729 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB38P57729 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB38P57729 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RAB38P57729 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RAB38P57729 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB38P57729 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB38P57729 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB38P57729 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB38P57729 AC112907.3-201ENST00000577781 2400 ntBASIC18.65■□□□□ 0.58
RAB38P57729 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.65■□□□□ 0.58
RAB38P57729 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RAB38P57729 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB38P57729 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB38P57729 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB38P57729 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB38P57729 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB38P57729 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB38P57729 TFP1-202ENST00000475455 1573 ntBASIC18.65■□□□□ 0.58
RAB38P57729 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB38P57729 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
RAB38P57729 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.65■□□□□ 0.58
RAB38P57729 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB38P57729 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.65■□□□□ 0.58
RAB38P57729 PRKY-204ENST00000533551 1019 ntBASIC18.65■□□□□ 0.58
RAB38P57729 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB38P57729 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.65■□□□□ 0.58
RAB38P57729 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB38P57729 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB38P57729 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB38P57729 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms