Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
CLDN6P56747 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.1■□□□□ 0.65
CLDN6P56747 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CLDN6P56747 MESTP1-201ENST00000404287 994 ntBASIC19.1■□□□□ 0.65
CLDN6P56747 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN6P56747 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.1■□□□□ 0.65
CLDN6P56747 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.1■□□□□ 0.65
CLDN6P56747 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.1■□□□□ 0.65
CLDN6P56747 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.1■□□□□ 0.65
CLDN6P56747 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN6P56747 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN6P56747 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN6P56747 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN6P56747 PTBP1P-201ENST00000554374 1601 ntBASIC19.1■□□□□ 0.65
CLDN6P56747 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.1■□□□□ 0.65
CLDN6P56747 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN6P56747 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN6P56747 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN6P56747 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.1■□□□□ 0.65
CLDN6P56747 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN6P56747 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.09■□□□□ 0.65
CLDN6P56747 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.09■□□□□ 0.65
CLDN6P56747 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.09■□□□□ 0.65
CLDN6P56747 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CLDN6P56747 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN6P56747 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.09■□□□□ 0.65
CLDN6P56747 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN6P56747 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN6P56747 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.09■□□□□ 0.65
CLDN6P56747 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN6P56747 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
CLDN6P56747 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.09■□□□□ 0.65
CLDN6P56747 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.09■□□□□ 0.65
CLDN6P56747 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.09■□□□□ 0.65
CLDN6P56747 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.09■□□□□ 0.65
CLDN6P56747 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.09■□□□□ 0.65
CLDN6P56747 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN6P56747 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.09■□□□□ 0.65
CLDN6P56747 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN6P56747 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
CLDN6P56747 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN6P56747 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN6P56747 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN6P56747 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.08■□□□□ 0.65
CLDN6P56747 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN6P56747 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
CLDN6P56747 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN6P56747 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN6P56747 ATP5G1P1-201ENST00000448724 379 ntBASIC19.08■□□□□ 0.64
CLDN6P56747 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.08■□□□□ 0.64
CLDN6P56747 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.08■□□□□ 0.64
CLDN6P56747 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.08■□□□□ 0.64
CLDN6P56747 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.08■□□□□ 0.64
CLDN6P56747 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.08■□□□□ 0.64
CLDN6P56747 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.08■□□□□ 0.64
CLDN6P56747 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CLDN6P56747 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN6P56747 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CLDN6P56747 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.08■□□□□ 0.64
CLDN6P56747 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.08■□□□□ 0.64
CLDN6P56747 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN6P56747 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN6P56747 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN6P56747 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN6P56747 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN6P56747 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN6P56747 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.07■□□□□ 0.64
CLDN6P56747 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CLDN6P56747 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CLDN6P56747 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.07■□□□□ 0.64
CLDN6P56747 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CLDN6P56747 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.07■□□□□ 0.64
CLDN6P56747 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN6P56747 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN6P56747 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.07■□□□□ 0.64
CLDN6P56747 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CLDN6P56747 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.07■□□□□ 0.64
CLDN6P56747 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN6P56747 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN6P56747 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CLDN6P56747 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CLDN6P56747 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN6P56747 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CLDN6P56747 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CLDN6P56747 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN6P56747 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CLDN6P56747 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN6P56747 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN6P56747 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.06■□□□□ 0.64
CLDN6P56747 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN6P56747 LIN28AP1-201ENST00000429574 405 ntBASIC19.06■□□□□ 0.64
CLDN6P56747 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN6P56747 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.06■□□□□ 0.64
CLDN6P56747 AL121894.2-201ENST00000602977 491 ntBASIC19.06■□□□□ 0.64
CLDN6P56747 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN6P56747 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
CLDN6P56747 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN6P56747 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
CLDN6P56747 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN6P56747 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms