Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CACNA2D1P54289 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CACNA2D1P54289 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CACNA2D1P54289 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CACNA2D1P54289 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CACNA2D1P54289 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CACNA2D1P54289 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CACNA2D1P54289 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CACNA2D1P54289 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.04■□□□□ 0.96
CACNA2D1P54289 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.04■□□□□ 0.96
CACNA2D1P54289 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.04■□□□□ 0.96
CACNA2D1P54289 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.04■□□□□ 0.96
CACNA2D1P54289 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CACNA2D1P54289 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CACNA2D1P54289 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.04■□□□□ 0.96
CACNA2D1P54289 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CACNA2D1P54289 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CACNA2D1P54289 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
CACNA2D1P54289 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
CACNA2D1P54289 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CACNA2D1P54289 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CACNA2D1P54289 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.03■□□□□ 0.96
CACNA2D1P54289 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CACNA2D1P54289 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.03■□□□□ 0.96
CACNA2D1P54289 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CACNA2D1P54289 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.03■□□□□ 0.96
CACNA2D1P54289 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.03■□□□□ 0.96
CACNA2D1P54289 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.03■□□□□ 0.96
CACNA2D1P54289 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.03■□□□□ 0.96
CACNA2D1P54289 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.03■□□□□ 0.96
CACNA2D1P54289 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.03■□□□□ 0.96
CACNA2D1P54289 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.03■□□□□ 0.96
CACNA2D1P54289 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CACNA2D1P54289 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CACNA2D1P54289 AC007952.6-201ENST00000573168 2673 ntBASIC21.03■□□□□ 0.96
CACNA2D1P54289 AC003957.1-201ENST00000625108 2673 ntBASIC21.03■□□□□ 0.96
CACNA2D1P54289 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.03■□□□□ 0.96
CACNA2D1P54289 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CACNA2D1P54289 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.03■□□□□ 0.96
CACNA2D1P54289 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CACNA2D1P54289 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CACNA2D1P54289 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CACNA2D1P54289 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CACNA2D1P54289 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CACNA2D1P54289 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CACNA2D1P54289 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.02■□□□□ 0.96
CACNA2D1P54289 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.02■□□□□ 0.96
CACNA2D1P54289 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.02■□□□□ 0.96
CACNA2D1P54289 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CACNA2D1P54289 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CACNA2D1P54289 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CACNA2D1P54289 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CACNA2D1P54289 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CACNA2D1P54289 KRASP1-201ENST00000407852 552 ntBASIC21.02■□□□□ 0.96
CACNA2D1P54289 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.02■□□□□ 0.96
CACNA2D1P54289 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.02■□□□□ 0.96
CACNA2D1P54289 FAM197Y4-202ENST00000622692 608 ntBASIC21.02■□□□□ 0.96
CACNA2D1P54289 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.02■□□□□ 0.96
CACNA2D1P54289 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CACNA2D1P54289 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CACNA2D1P54289 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CACNA2D1P54289 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CACNA2D1P54289 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
CACNA2D1P54289 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CACNA2D1P54289 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CACNA2D1P54289 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
CACNA2D1P54289 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.01■□□□□ 0.95
CACNA2D1P54289 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CACNA2D1P54289 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.01■□□□□ 0.95
CACNA2D1P54289 LINC01006-201ENST00000333319 2292 ntBASIC21.01■□□□□ 0.95
CACNA2D1P54289 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CACNA2D1P54289 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CACNA2D1P54289 AC239809.2-201ENST00000415381 517 ntBASIC21.01■□□□□ 0.95
CACNA2D1P54289 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.01■□□□□ 0.95
CACNA2D1P54289 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.01■□□□□ 0.95
CACNA2D1P54289 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.01■□□□□ 0.95
CACNA2D1P54289 AL121829.2-201ENST00000620908 328 ntBASIC21.01■□□□□ 0.95
CACNA2D1P54289 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CACNA2D1P54289 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CACNA2D1P54289 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CACNA2D1P54289 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.01■□□□□ 0.95
CACNA2D1P54289 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CACNA2D1P54289 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.01■□□□□ 0.95
CACNA2D1P54289 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CACNA2D1P54289 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CACNA2D1P54289 AL162377.1-201ENST00000618844 1793 ntBASIC21■□□□□ 0.95
CACNA2D1P54289 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CACNA2D1P54289 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21■□□□□ 0.95
CACNA2D1P54289 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CACNA2D1P54289 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CACNA2D1P54289 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CACNA2D1P54289 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21■□□□□ 0.95
CACNA2D1P54289 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21■□□□□ 0.95
CACNA2D1P54289 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21■□□□□ 0.95
CACNA2D1P54289 PNN-205ENST00000556530 601 ntTSL 2 BASIC21■□□□□ 0.95
CACNA2D1P54289 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21■□□□□ 0.95
CACNA2D1P54289 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CACNA2D1P54289 GABARAPL3-202ENST00000624044 1851 ntBASIC21■□□□□ 0.95
CACNA2D1P54289 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.99■□□□□ 0.95
CACNA2D1P54289 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms