Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.47■□□□□ 0.71
CLCNKAP51800 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLCNKAP51800 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCNKAP51800 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLCNKAP51800 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLCNKAP51800 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.47■□□□□ 0.71
CLCNKAP51800 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.47■□□□□ 0.71
CLCNKAP51800 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.46■□□□□ 0.71
CLCNKAP51800 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CLCNKAP51800 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CLCNKAP51800 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLCNKAP51800 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CLCNKAP51800 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CLCNKAP51800 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCNKAP51800 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLCNKAP51800 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CLCNKAP51800 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCNKAP51800 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCNKAP51800 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCNKAP51800 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.46■□□□□ 0.71
CLCNKAP51800 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCNKAP51800 AC093827.2-201ENST00000512654 315 ntBASIC19.46■□□□□ 0.71
CLCNKAP51800 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.46■□□□□ 0.71
CLCNKAP51800 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CLCNKAP51800 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCNKAP51800 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCNKAP51800 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.46■□□□□ 0.71
CLCNKAP51800 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLCNKAP51800 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.46■□□□□ 0.71
CLCNKAP51800 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLCNKAP51800 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.45■□□□□ 0.7
CLCNKAP51800 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.45■□□□□ 0.7
CLCNKAP51800 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CLCNKAP51800 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CLCNKAP51800 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CLCNKAP51800 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLCNKAP51800 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.45■□□□□ 0.7
CLCNKAP51800 KRASP1-201ENST00000407852 552 ntBASIC19.45■□□□□ 0.7
CLCNKAP51800 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.45■□□□□ 0.7
CLCNKAP51800 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.45■□□□□ 0.7
CLCNKAP51800 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.45■□□□□ 0.7
CLCNKAP51800 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.45■□□□□ 0.7
CLCNKAP51800 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.45■□□□□ 0.7
CLCNKAP51800 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCNKAP51800 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCNKAP51800 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.45■□□□□ 0.7
CLCNKAP51800 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.45■□□□□ 0.7
CLCNKAP51800 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLCNKAP51800 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
CLCNKAP51800 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCNKAP51800 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.44■□□□□ 0.7
CLCNKAP51800 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.44■□□□□ 0.7
CLCNKAP51800 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.44■□□□□ 0.7
CLCNKAP51800 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCNKAP51800 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLCNKAP51800 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CLCNKAP51800 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCNKAP51800 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCNKAP51800 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CLCNKAP51800 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLCNKAP51800 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCNKAP51800 AC008550.1-201ENST00000511500 884 ntBASIC19.44■□□□□ 0.7
CLCNKAP51800 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.44■□□□□ 0.7
CLCNKAP51800 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
CLCNKAP51800 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLCNKAP51800 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.44■□□□□ 0.7
CLCNKAP51800 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLCNKAP51800 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.44■□□□□ 0.7
CLCNKAP51800 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.44■□□□□ 0.7
CLCNKAP51800 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.44■□□□□ 0.7
CLCNKAP51800 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.44■□□□□ 0.7
CLCNKAP51800 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCNKAP51800 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
CLCNKAP51800 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLCNKAP51800 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCNKAP51800 BX119927.1-201ENST00000636596 1552 ntBASIC19.44■□□□□ 0.7
CLCNKAP51800 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCNKAP51800 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCNKAP51800 AL391422.3-201ENST00000603791 2761 ntBASIC19.44■□□□□ 0.7
CLCNKAP51800 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCNKAP51800 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCNKAP51800 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CLCNKAP51800 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCNKAP51800 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.43■□□□□ 0.7
CLCNKAP51800 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCNKAP51800 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.43■□□□□ 0.7
CLCNKAP51800 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCNKAP51800 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCNKAP51800 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCNKAP51800 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCNKAP51800 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCNKAP51800 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCNKAP51800 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.43■□□□□ 0.7
CLCNKAP51800 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCNKAP51800 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCNKAP51800 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCNKAP51800 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCNKAP51800 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCNKAP51800 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.43■□□□□ 0.7
CLCNKAP51800 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms