Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1A1P48729 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.66■□□□□ 0.42
CSNK1A1P48729 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1A1P48729 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CSNK1A1P48729 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.66■□□□□ 0.42
CSNK1A1P48729 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.66■□□□□ 0.42
CSNK1A1P48729 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.66■□□□□ 0.42
CSNK1A1P48729 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1A1P48729 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1A1P48729 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1A1P48729 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1A1P48729 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1A1P48729 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.66■□□□□ 0.42
CSNK1A1P48729 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.66■□□□□ 0.42
CSNK1A1P48729 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.66■□□□□ 0.42
CSNK1A1P48729 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1A1P48729 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1A1P48729 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1A1P48729 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1A1P48729 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1A1P48729 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1A1P48729 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1A1P48729 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.65■□□□□ 0.42
CSNK1A1P48729 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1A1P48729 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1A1P48729 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1A1P48729 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1A1P48729 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1A1P48729 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1A1P48729 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1A1P48729 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.65■□□□□ 0.42
CSNK1A1P48729 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.65■□□□□ 0.42
CSNK1A1P48729 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1A1P48729 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.65■□□□□ 0.42
CSNK1A1P48729 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.65■□□□□ 0.42
CSNK1A1P48729 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
CSNK1A1P48729 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.65■□□□□ 0.42
CSNK1A1P48729 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1A1P48729 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1A1P48729 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CSNK1A1P48729 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1A1P48729 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.65■□□□□ 0.42
CSNK1A1P48729 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.65■□□□□ 0.42
CSNK1A1P48729 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1A1P48729 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CSNK1A1P48729 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1A1P48729 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1A1P48729 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CSNK1A1P48729 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CSNK1A1P48729 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
CSNK1A1P48729 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CSNK1A1P48729 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CSNK1A1P48729 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.64■□□□□ 0.42
CSNK1A1P48729 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CSNK1A1P48729 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1A1P48729 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CSNK1A1P48729 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CSNK1A1P48729 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1A1P48729 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.64■□□□□ 0.41
CSNK1A1P48729 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CSNK1A1P48729 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.64■□□□□ 0.41
CSNK1A1P48729 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1A1P48729 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1A1P48729 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1A1P48729 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.64■□□□□ 0.41
CSNK1A1P48729 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1A1P48729 AC005829.2-201ENST00000571422 1056 ntBASIC17.64■□□□□ 0.41
CSNK1A1P48729 AC083880.1-201ENST00000608266 535 ntBASIC17.64■□□□□ 0.41
CSNK1A1P48729 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CSNK1A1P48729 HLA-B-256ENST00000639848 1089 ntBASIC17.64■□□□□ 0.41
CSNK1A1P48729 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1A1P48729 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1A1P48729 AC092368.3-202ENST00000574180 1591 ntBASIC17.64■□□□□ 0.41
CSNK1A1P48729 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1A1P48729 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1A1P48729 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1A1P48729 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1A1P48729 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1A1P48729 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1A1P48729 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1A1P48729 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1A1P48729 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1A1P48729 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1A1P48729 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CSNK1A1P48729 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1A1P48729 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.63■□□□□ 0.41
CSNK1A1P48729 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.63■□□□□ 0.41
CSNK1A1P48729 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1A1P48729 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1A1P48729 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.63■□□□□ 0.41
CSNK1A1P48729 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.63■□□□□ 0.41
CSNK1A1P48729 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1A1P48729 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1A1P48729 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.63■□□□□ 0.41
CSNK1A1P48729 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CSNK1A1P48729 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1A1P48729 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.63■□□□□ 0.41
CSNK1A1P48729 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
CSNK1A1P48729 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1A1P48729 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms