Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A3P43003 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A3P43003 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A3P43003 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC1A3P43003 GPX1P1-201ENST00000388829 606 ntBASIC18.23■□□□□ 0.51
SLC1A3P43003 MIPEPP3-201ENST00000412105 444 ntBASIC18.23■□□□□ 0.51
SLC1A3P43003 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SLC1A3P43003 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SLC1A3P43003 AL031963.3-201ENST00000606441 850 ntBASIC18.23■□□□□ 0.51
SLC1A3P43003 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A3P43003 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A3P43003 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SLC1A3P43003 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A3P43003 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A3P43003 KRT8P20-201ENST00000423953 1409 ntBASIC18.23■□□□□ 0.51
SLC1A3P43003 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A3P43003 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A3P43003 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SLC1A3P43003 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SLC1A3P43003 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC1A3P43003 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A3P43003 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A3P43003 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A3P43003 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A3P43003 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
SLC1A3P43003 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A3P43003 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A3P43003 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A3P43003 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A3P43003 SLC29A4P1-201ENST00000398760 971 ntBASIC18.22■□□□□ 0.51
SLC1A3P43003 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC1A3P43003 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SLC1A3P43003 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC1A3P43003 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC1A3P43003 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A3P43003 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SLC1A3P43003 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC1A3P43003 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A3P43003 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC1A3P43003 BX323043.1-201ENST00000641006 1765 ntBASIC18.22■□□□□ 0.51
SLC1A3P43003 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A3P43003 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A3P43003 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC1A3P43003 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC1A3P43003 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC1A3P43003 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC1A3P43003 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC1A3P43003 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC1A3P43003 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC1A3P43003 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC1A3P43003 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC1A3P43003 HLA-G-202ENST00000376815 851 ntBASIC18.21■□□□□ 0.51
SLC1A3P43003 HLA-G-203ENST00000376818 1127 ntBASIC18.21■□□□□ 0.51
SLC1A3P43003 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SLC1A3P43003 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SLC1A3P43003 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.21■□□□□ 0.51
SLC1A3P43003 AC023632.3-201ENST00000521633 145 ntBASIC18.21■□□□□ 0.51
SLC1A3P43003 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC1A3P43003 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SLC1A3P43003 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.21■□□□□ 0.51
SLC1A3P43003 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC1A3P43003 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC1A3P43003 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC1A3P43003 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC1A3P43003 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC1A3P43003 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC1A3P43003 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC1A3P43003 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC1A3P43003 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A3P43003 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A3P43003 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A3P43003 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC1A3P43003 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A3P43003 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
SLC1A3P43003 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A3P43003 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A3P43003 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A3P43003 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A3P43003 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.2■□□□□ 0.5
SLC1A3P43003 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.2■□□□□ 0.5
SLC1A3P43003 TSPY6P-201ENST00000448518 926 ntBASIC18.2■□□□□ 0.5
SLC1A3P43003 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A3P43003 AC092118.2-201ENST00000613495 667 ntBASIC18.2■□□□□ 0.5
SLC1A3P43003 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC1A3P43003 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A3P43003 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SLC1A3P43003 AL158211.5-201ENST00000623583 2518 ntBASIC18.2■□□□□ 0.5
SLC1A3P43003 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SLC1A3P43003 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A3P43003 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A3P43003 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC1A3P43003 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A3P43003 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SLC1A3P43003 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A3P43003 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC1A3P43003 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A3P43003 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A3P43003 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A3P43003 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SLC1A3P43003 KRT16P6-202ENST00000425692 1426 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms