Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFC5P40937 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RFC5P40937 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RFC5P40937 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RFC5P40937 AC012618.2-201ENST00000428058 849 ntBASIC21.93■■□□□ 1.1
RFC5P40937 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.93■■□□□ 1.1
RFC5P40937 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
RFC5P40937 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.93■■□□□ 1.1
RFC5P40937 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.93■■□□□ 1.1
RFC5P40937 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFC5P40937 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.93■■□□□ 1.1
RFC5P40937 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFC5P40937 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFC5P40937 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.92■■□□□ 1.1
RFC5P40937 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.92■■□□□ 1.1
RFC5P40937 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.92■■□□□ 1.1
RFC5P40937 AP006587.1-201ENST00000534129 1502 ntBASIC21.92■■□□□ 1.1
RFC5P40937 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFC5P40937 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFC5P40937 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFC5P40937 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFC5P40937 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RFC5P40937 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RFC5P40937 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RFC5P40937 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFC5P40937 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.92■■□□□ 1.1
RFC5P40937 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RFC5P40937 Z99916.2-201ENST00000604037 246 ntBASIC21.92■■□□□ 1.1
RFC5P40937 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.92■■□□□ 1.1
RFC5P40937 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFC5P40937 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFC5P40937 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFC5P40937 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFC5P40937 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.92■■□□□ 1.1
RFC5P40937 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFC5P40937 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
RFC5P40937 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RFC5P40937 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.91■■□□□ 1.1
RFC5P40937 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.91■■□□□ 1.1
RFC5P40937 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFC5P40937 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFC5P40937 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFC5P40937 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFC5P40937 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.91■■□□□ 1.1
RFC5P40937 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.91■■□□□ 1.1
RFC5P40937 AC233702.5-201ENST00000584107 538 ntBASIC21.91■■□□□ 1.1
RFC5P40937 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
RFC5P40937 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFC5P40937 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFC5P40937 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RFC5P40937 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFC5P40937 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFC5P40937 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
RFC5P40937 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFC5P40937 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.9■■□□□ 1.1
RFC5P40937 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.9■■□□□ 1.1
RFC5P40937 RPS2P55-201ENST00000397318 883 ntBASIC21.9■■□□□ 1.1
RFC5P40937 AC107956.1-201ENST00000494359 873 ntBASIC21.9■■□□□ 1.1
RFC5P40937 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.9■■□□□ 1.1
RFC5P40937 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.9■■□□□ 1.1
RFC5P40937 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.9■■□□□ 1.1
RFC5P40937 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RFC5P40937 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.9■■□□□ 1.1
RFC5P40937 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RFC5P40937 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFC5P40937 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.9■■□□□ 1.1
RFC5P40937 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
RFC5P40937 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.9■■□□□ 1.1
RFC5P40937 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RFC5P40937 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
RFC5P40937 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RFC5P40937 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.89■■□□□ 1.1
RFC5P40937 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RFC5P40937 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.89■■□□□ 1.1
RFC5P40937 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RFC5P40937 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RFC5P40937 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RFC5P40937 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.89■■□□□ 1.09
RFC5P40937 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RFC5P40937 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RFC5P40937 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
RFC5P40937 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RFC5P40937 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RFC5P40937 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RFC5P40937 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.89■■□□□ 1.09
RFC5P40937 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RFC5P40937 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.89■■□□□ 1.09
RFC5P40937 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.89■■□□□ 1.09
RFC5P40937 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RFC5P40937 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RFC5P40937 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RFC5P40937 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RFC5P40937 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.88■■□□□ 1.09
RFC5P40937 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RFC5P40937 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
RFC5P40937 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.88■■□□□ 1.09
RFC5P40937 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.88■■□□□ 1.09
RFC5P40937 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.88■■□□□ 1.09
RFC5P40937 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RFC5P40937 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms