Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GDNFP39905 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
GDNFP39905 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDNFP39905 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
GDNFP39905 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.24■□□□□ 0.35
GDNFP39905 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
GDNFP39905 AC020763.4-201ENST00000623414 4170 ntBASIC17.24■□□□□ 0.35
GDNFP39905 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GDNFP39905 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GDNFP39905 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GDNFP39905 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GDNFP39905 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GDNFP39905 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GDNFP39905 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.24■□□□□ 0.35
GDNFP39905 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.24■□□□□ 0.35
GDNFP39905 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GDNFP39905 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDNFP39905 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDNFP39905 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDNFP39905 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.23■□□□□ 0.35
GDNFP39905 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDNFP39905 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
GDNFP39905 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.23■□□□□ 0.35
GDNFP39905 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.23■□□□□ 0.35
GDNFP39905 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.23■□□□□ 0.35
GDNFP39905 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
GDNFP39905 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDNFP39905 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.23■□□□□ 0.35
GDNFP39905 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GDNFP39905 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.23■□□□□ 0.35
GDNFP39905 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.23■□□□□ 0.35
GDNFP39905 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.23■□□□□ 0.35
GDNFP39905 RARRES2P6-201ENST00000567333 442 ntBASIC17.23■□□□□ 0.35
GDNFP39905 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.23■□□□□ 0.35
GDNFP39905 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.23■□□□□ 0.35
GDNFP39905 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.23■□□□□ 0.35
GDNFP39905 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.23■□□□□ 0.35
GDNFP39905 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.23■□□□□ 0.35
GDNFP39905 MIR2861-201ENST00000636310 90 ntBASIC17.23■□□□□ 0.35
GDNFP39905 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDNFP39905 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDNFP39905 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.23■□□□□ 0.35
GDNFP39905 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GDNFP39905 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDNFP39905 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDNFP39905 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.23■□□□□ 0.35
GDNFP39905 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDNFP39905 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDNFP39905 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDNFP39905 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.22■□□□□ 0.35
GDNFP39905 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
GDNFP39905 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GDNFP39905 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDNFP39905 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDNFP39905 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
GDNFP39905 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
GDNFP39905 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.22■□□□□ 0.35
GDNFP39905 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDNFP39905 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.22■□□□□ 0.35
GDNFP39905 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.22■□□□□ 0.35
GDNFP39905 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.22■□□□□ 0.35
GDNFP39905 AC138907.5-202ENST00000569484 235 ntBASIC17.22■□□□□ 0.35
GDNFP39905 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDNFP39905 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
GDNFP39905 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDNFP39905 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDNFP39905 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
GDNFP39905 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDNFP39905 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
GDNFP39905 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDNFP39905 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.21■□□□□ 0.35
GDNFP39905 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDNFP39905 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDNFP39905 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDNFP39905 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GDNFP39905 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDNFP39905 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.21■□□□□ 0.35
GDNFP39905 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDNFP39905 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDNFP39905 AC007613.1-201ENST00000572811 2597 ntBASIC17.21■□□□□ 0.35
GDNFP39905 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.21■□□□□ 0.35
GDNFP39905 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDNFP39905 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDNFP39905 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDNFP39905 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.21■□□□□ 0.35
GDNFP39905 AC010141.2-201ENST00000452426 721 ntBASIC17.21■□□□□ 0.35
GDNFP39905 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDNFP39905 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.21■□□□□ 0.35
GDNFP39905 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.21■□□□□ 0.35
GDNFP39905 AIRN-201ENST00000601203 4374 ntBASIC17.21■□□□□ 0.34
GDNFP39905 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GDNFP39905 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GDNFP39905 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.2■□□□□ 0.34
GDNFP39905 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
GDNFP39905 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDNFP39905 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
GDNFP39905 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
GDNFP39905 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.2■□□□□ 0.34
GDNFP39905 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.2■□□□□ 0.34
GDNFP39905 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms