Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.83■□□□□ 0.61
RPL3P39023 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPL3P39023 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.83■□□□□ 0.6
RPL3P39023 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPL3P39023 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RPL3P39023 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.83■□□□□ 0.6
RPL3P39023 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
RPL3P39023 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RPL3P39023 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.83■□□□□ 0.6
RPL3P39023 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPL3P39023 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPL3P39023 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.83■□□□□ 0.6
RPL3P39023 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPL3P39023 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.83■□□□□ 0.6
RPL3P39023 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RPL3P39023 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPL3P39023 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.83■□□□□ 0.6
RPL3P39023 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPL3P39023 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPL3P39023 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPL3P39023 PHGDH-210ENST00000641115 1638 ntBASIC18.82■□□□□ 0.6
RPL3P39023 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPL3P39023 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPL3P39023 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPL3P39023 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPL3P39023 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.82■□□□□ 0.6
RPL3P39023 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPL3P39023 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.82■□□□□ 0.6
RPL3P39023 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPL3P39023 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RPL3P39023 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.82■□□□□ 0.6
RPL3P39023 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPL3P39023 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPL3P39023 AC007952.6-201ENST00000573168 2673 ntBASIC18.82■□□□□ 0.6
RPL3P39023 AC003957.1-201ENST00000625108 2673 ntBASIC18.82■□□□□ 0.6
RPL3P39023 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPL3P39023 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.82■□□□□ 0.6
RPL3P39023 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPL3P39023 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPL3P39023 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPL3P39023 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.81■□□□□ 0.6
RPL3P39023 TREX1-205ENST00000625293 1783 ntBASIC18.81■□□□□ 0.6
RPL3P39023 KRT17P1-201ENST00000399211 1546 ntBASIC18.81■□□□□ 0.6
RPL3P39023 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPL3P39023 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.81■□□□□ 0.6
RPL3P39023 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPL3P39023 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPL3P39023 AC093787.1-201ENST00000450396 207 ntBASIC18.81■□□□□ 0.6
RPL3P39023 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.81■□□□□ 0.6
RPL3P39023 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
RPL3P39023 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.81■□□□□ 0.6
RPL3P39023 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.81■□□□□ 0.6
RPL3P39023 AL158211.5-201ENST00000623583 2518 ntBASIC18.81■□□□□ 0.6
RPL3P39023 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPL3P39023 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPL3P39023 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPL3P39023 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.81■□□□□ 0.6
RPL3P39023 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.81■□□□□ 0.6
RPL3P39023 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPL3P39023 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPL3P39023 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPL3P39023 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.81■□□□□ 0.6
RPL3P39023 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPL3P39023 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RPL3P39023 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPL3P39023 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPL3P39023 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPL3P39023 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.8■□□□□ 0.6
RPL3P39023 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.8■□□□□ 0.6
RPL3P39023 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPL3P39023 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPL3P39023 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPL3P39023 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPL3P39023 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.8■□□□□ 0.6
RPL3P39023 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RPL3P39023 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.8■□□□□ 0.6
RPL3P39023 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RPL3P39023 AC080038.1-201ENST00000611274 1154 ntBASIC18.8■□□□□ 0.6
RPL3P39023 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPL3P39023 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPL3P39023 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.8■□□□□ 0.6
RPL3P39023 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPL3P39023 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.8■□□□□ 0.6
RPL3P39023 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPL3P39023 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPL3P39023 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.79■□□□□ 0.6
RPL3P39023 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.79■□□□□ 0.6
RPL3P39023 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPL3P39023 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPL3P39023 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPL3P39023 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.79■□□□□ 0.6
RPL3P39023 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPL3P39023 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.79■□□□□ 0.6
RPL3P39023 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.79■□□□□ 0.6
RPL3P39023 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPL3P39023 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPL3P39023 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPL3P39023 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPL3P39023 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPL3P39023 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms