Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PCK1P35558 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
PCK1P35558 NCF1B-203ENST00000435988 1254 ntBASIC20.85■□□□□ 0.93
PCK1P35558 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.85■□□□□ 0.93
PCK1P35558 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCK1P35558 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.85■□□□□ 0.93
PCK1P35558 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.85■□□□□ 0.93
PCK1P35558 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PCK1P35558 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCK1P35558 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCK1P35558 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCK1P35558 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.85■□□□□ 0.93
PCK1P35558 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCK1P35558 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PCK1P35558 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCK1P35558 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCK1P35558 KRT16P6-202ENST00000425692 1426 ntBASIC20.85■□□□□ 0.93
PCK1P35558 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCK1P35558 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.85■□□□□ 0.93
PCK1P35558 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PCK1P35558 AFG3L1P-217ENST00000557444 2447 ntBASIC20.85■□□□□ 0.93
PCK1P35558 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
PCK1P35558 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PCK1P35558 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCK1P35558 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCK1P35558 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PCK1P35558 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PCK1P35558 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCK1P35558 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCK1P35558 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCK1P35558 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCK1P35558 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCK1P35558 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCK1P35558 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCK1P35558 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCK1P35558 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PCK1P35558 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.84■□□□□ 0.93
PCK1P35558 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.84■□□□□ 0.93
PCK1P35558 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PCK1P35558 MIPEPP3-201ENST00000412105 444 ntBASIC20.84■□□□□ 0.93
PCK1P35558 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
PCK1P35558 AC092666.2-201ENST00000613287 246 ntBASIC20.84■□□□□ 0.93
PCK1P35558 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PCK1P35558 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PCK1P35558 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.84■□□□□ 0.93
PCK1P35558 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCK1P35558 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.84■□□□□ 0.93
PCK1P35558 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCK1P35558 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCK1P35558 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCK1P35558 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCK1P35558 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCK1P35558 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCK1P35558 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCK1P35558 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCK1P35558 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.83■□□□□ 0.93
PCK1P35558 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCK1P35558 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCK1P35558 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCK1P35558 GPX1P1-201ENST00000388829 606 ntBASIC20.83■□□□□ 0.93
PCK1P35558 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PCK1P35558 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCK1P35558 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PCK1P35558 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.83■□□□□ 0.93
PCK1P35558 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PCK1P35558 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCK1P35558 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCK1P35558 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PCK1P35558 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCK1P35558 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.83■□□□□ 0.92
PCK1P35558 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.83■□□□□ 0.92
PCK1P35558 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.82■□□□□ 0.92
PCK1P35558 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCK1P35558 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCK1P35558 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCK1P35558 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCK1P35558 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCK1P35558 GUSBP6-202ENST00000438529 1198 ntBASIC20.82■□□□□ 0.92
PCK1P35558 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PCK1P35558 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.82■□□□□ 0.92
PCK1P35558 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCK1P35558 AC092118.2-201ENST00000613495 667 ntBASIC20.82■□□□□ 0.92
PCK1P35558 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCK1P35558 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.82■□□□□ 0.92
PCK1P35558 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PCK1P35558 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.82■□□□□ 0.92
PCK1P35558 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.82■□□□□ 0.92
PCK1P35558 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.82■□□□□ 0.92
PCK1P35558 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCK1P35558 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCK1P35558 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCK1P35558 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.81■□□□□ 0.92
PCK1P35558 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.81■□□□□ 0.92
PCK1P35558 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCK1P35558 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.81■□□□□ 0.92
PCK1P35558 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.81■□□□□ 0.92
PCK1P35558 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCK1P35558 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCK1P35558 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCK1P35558 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms