Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA3P32297 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.89■□□□□ 0.93
CHRNA3P32297 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.89■□□□□ 0.93
CHRNA3P32297 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA3P32297 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA3P32297 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.89■□□□□ 0.93
CHRNA3P32297 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA3P32297 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.88■□□□□ 0.93
CHRNA3P32297 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA3P32297 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA3P32297 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CHRNA3P32297 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA3P32297 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA3P32297 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA3P32297 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA3P32297 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CHRNA3P32297 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA3P32297 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA3P32297 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA3P32297 KRT18P6-201ENST00000555540 1265 ntBASIC20.88■□□□□ 0.93
CHRNA3P32297 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA3P32297 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CHRNA3P32297 AC100791.3-201ENST00000617619 330 ntBASIC20.88■□□□□ 0.93
CHRNA3P32297 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.88■□□□□ 0.93
CHRNA3P32297 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA3P32297 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CHRNA3P32297 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CHRNA3P32297 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA3P32297 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA3P32297 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.87■□□□□ 0.93
CHRNA3P32297 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA3P32297 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.87■□□□□ 0.93
CHRNA3P32297 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA3P32297 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA3P32297 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CHRNA3P32297 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA3P32297 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
CHRNA3P32297 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.87■□□□□ 0.93
CHRNA3P32297 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA3P32297 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.87■□□□□ 0.93
CHRNA3P32297 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.87■□□□□ 0.93
CHRNA3P32297 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.87■□□□□ 0.93
CHRNA3P32297 CD99P1-205ENST00000527459 561 ntBASIC20.87■□□□□ 0.93
CHRNA3P32297 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.87■□□□□ 0.93
CHRNA3P32297 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.87■□□□□ 0.93
CHRNA3P32297 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA3P32297 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA3P32297 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA3P32297 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA3P32297 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA3P32297 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA3P32297 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA3P32297 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA3P32297 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA3P32297 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CHRNA3P32297 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA3P32297 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA3P32297 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA3P32297 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA3P32297 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA3P32297 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.86■□□□□ 0.93
CHRNA3P32297 AL355472.2-201ENST00000422958 438 ntBASIC20.86■□□□□ 0.93
CHRNA3P32297 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.86■□□□□ 0.93
CHRNA3P32297 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.86■□□□□ 0.93
CHRNA3P32297 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA3P32297 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.86■□□□□ 0.93
CHRNA3P32297 AC098818.2-201ENST00000564925 2320 ntBASIC20.86■□□□□ 0.93
CHRNA3P32297 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.86■□□□□ 0.93
CHRNA3P32297 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.86■□□□□ 0.93
CHRNA3P32297 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA3P32297 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.85■□□□□ 0.93
CHRNA3P32297 AC005332.7-201ENST00000614046 2005 ntBASIC20.85■□□□□ 0.93
CHRNA3P32297 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA3P32297 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA3P32297 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA3P32297 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.85■□□□□ 0.93
CHRNA3P32297 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA3P32297 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.85■□□□□ 0.93
CHRNA3P32297 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA3P32297 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.85■□□□□ 0.93
CHRNA3P32297 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.85■□□□□ 0.93
CHRNA3P32297 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.85■□□□□ 0.93
CHRNA3P32297 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.85■□□□□ 0.93
CHRNA3P32297 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA3P32297 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA3P32297 AL020996.1-203ENST00000536896 2307 ntBASIC20.85■□□□□ 0.93
CHRNA3P32297 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
CHRNA3P32297 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA3P32297 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA3P32297 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA3P32297 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CHRNA3P32297 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.85■□□□□ 0.93
CHRNA3P32297 TREX1-205ENST00000625293 1783 ntBASIC20.85■□□□□ 0.93
CHRNA3P32297 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA3P32297 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNA3P32297 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.84■□□□□ 0.93
CHRNA3P32297 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.84■□□□□ 0.93
CHRNA3P32297 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNA3P32297 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNA3P32297 LSM12P1-201ENST00000411836 588 ntBASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms