Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.52■□□□□ 0.56
CHMP24386 AL589743.5-201ENST00000616611 1050 ntBASIC18.52■□□□□ 0.56
CHMP24386 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CHMP24386 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHMP24386 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHMP24386 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CHMP24386 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHMP24386 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.51■□□□□ 0.55
CHMP24386 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP24386 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP24386 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP24386 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP24386 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP24386 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.51■□□□□ 0.55
CHMP24386 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.51■□□□□ 0.55
CHMP24386 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP24386 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CHMP24386 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP24386 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.51■□□□□ 0.55
CHMP24386 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.51■□□□□ 0.55
CHMP24386 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
CHMP24386 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CHMP24386 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP24386 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP24386 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.51■□□□□ 0.55
CHMP24386 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.51■□□□□ 0.55
CHMP24386 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP24386 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP24386 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP24386 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP24386 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CHMP24386 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.51■□□□□ 0.55
CHMP24386 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP24386 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.5■□□□□ 0.55
CHMP24386 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.5■□□□□ 0.55
CHMP24386 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.5■□□□□ 0.55
CHMP24386 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.5■□□□□ 0.55
CHMP24386 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.5■□□□□ 0.55
CHMP24386 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.5■□□□□ 0.55
CHMP24386 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.5■□□□□ 0.55
CHMP24386 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP24386 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP24386 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP24386 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CHMP24386 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.5■□□□□ 0.55
CHMP24386 AL355472.2-201ENST00000422958 438 ntBASIC18.5■□□□□ 0.55
CHMP24386 AC097658.1-201ENST00000475555 843 ntBASIC18.5■□□□□ 0.55
CHMP24386 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.5■□□□□ 0.55
CHMP24386 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CHMP24386 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CHMP24386 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.5■□□□□ 0.55
CHMP24386 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP24386 AC098818.2-201ENST00000564925 2320 ntBASIC18.5■□□□□ 0.55
CHMP24386 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP24386 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP24386 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CHMP24386 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP24386 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP24386 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP24386 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.49■□□□□ 0.55
CHMP24386 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP24386 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP24386 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.49■□□□□ 0.55
CHMP24386 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP24386 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.49■□□□□ 0.55
CHMP24386 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.49■□□□□ 0.55
CHMP24386 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CHMP24386 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.49■□□□□ 0.55
CHMP24386 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.49■□□□□ 0.55
CHMP24386 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.49■□□□□ 0.55
CHMP24386 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.49■□□□□ 0.55
CHMP24386 CD99P1-205ENST00000527459 561 ntBASIC18.49■□□□□ 0.55
CHMP24386 KRT18P6-201ENST00000555540 1265 ntBASIC18.49■□□□□ 0.55
CHMP24386 AC098934.4-201ENST00000564127 592 ntBASIC18.49■□□□□ 0.55
CHMP24386 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CHMP24386 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.49■□□□□ 0.55
CHMP24386 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP24386 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.49■□□□□ 0.55
CHMP24386 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CHMP24386 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP24386 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CHMP24386 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.49■□□□□ 0.55
CHMP24386 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP24386 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CHMP24386 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
CHMP24386 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP24386 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP24386 AC087633.2-202ENST00000565166 1439 ntBASIC18.49■□□□□ 0.55
CHMP24386 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP24386 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CHMP24386 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP24386 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP24386 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP24386 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CHMP24386 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP24386 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP24386 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP24386 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP24386 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.48■□□□□ 0.55
CHMP24386 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms