Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.09■□□□□ 0.33
CCL1P22362 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.09■□□□□ 0.33
CCL1P22362 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCL1P22362 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL1P22362 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.09■□□□□ 0.33
CCL1P22362 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL1P22362 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCL1P22362 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL1P22362 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCL1P22362 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.09■□□□□ 0.33
CCL1P22362 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCL1P22362 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.09■□□□□ 0.33
CCL1P22362 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCL1P22362 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.09■□□□□ 0.33
CCL1P22362 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCL1P22362 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCL1P22362 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCL1P22362 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.09■□□□□ 0.33
CCL1P22362 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL1P22362 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL1P22362 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.09■□□□□ 0.33
CCL1P22362 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.09■□□□□ 0.33
CCL1P22362 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.09■□□□□ 0.33
CCL1P22362 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL1P22362 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.09■□□□□ 0.33
CCL1P22362 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.09■□□□□ 0.33
CCL1P22362 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
CCL1P22362 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CCL1P22362 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCL1P22362 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL1P22362 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL1P22362 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCL1P22362 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CCL1P22362 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.08■□□□□ 0.32
CCL1P22362 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.08■□□□□ 0.32
CCL1P22362 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
CCL1P22362 AC004911.1-201ENST00000416316 871 ntBASIC17.08■□□□□ 0.32
CCL1P22362 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.08■□□□□ 0.32
CCL1P22362 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.08■□□□□ 0.32
CCL1P22362 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.08■□□□□ 0.32
CCL1P22362 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.08■□□□□ 0.32
CCL1P22362 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL1P22362 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCL1P22362 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.08■□□□□ 0.32
CCL1P22362 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCL1P22362 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL1P22362 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CCL1P22362 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL1P22362 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL1P22362 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL1P22362 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CCL1P22362 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL1P22362 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCL1P22362 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.07■□□□□ 0.32
CCL1P22362 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCL1P22362 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCL1P22362 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.07■□□□□ 0.32
CCL1P22362 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL1P22362 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.07■□□□□ 0.32
CCL1P22362 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL1P22362 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL1P22362 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.07■□□□□ 0.32
CCL1P22362 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.07■□□□□ 0.32
CCL1P22362 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL1P22362 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCL1P22362 GPX1P1-201ENST00000388829 606 ntBASIC17.07■□□□□ 0.32
CCL1P22362 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.07■□□□□ 0.32
CCL1P22362 LSM12P1-201ENST00000411836 588 ntBASIC17.07■□□□□ 0.32
CCL1P22362 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL1P22362 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.07■□□□□ 0.32
CCL1P22362 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.07■□□□□ 0.32
CCL1P22362 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCL1P22362 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.07■□□□□ 0.32
CCL1P22362 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL1P22362 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL1P22362 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CCL1P22362 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL1P22362 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.07■□□□□ 0.32
CCL1P22362 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.07■□□□□ 0.32
CCL1P22362 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL1P22362 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCL1P22362 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL1P22362 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCL1P22362 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CCL1P22362 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL1P22362 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCL1P22362 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL1P22362 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCL1P22362 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CCL1P22362 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL1P22362 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL1P22362 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL1P22362 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.06■□□□□ 0.32
CCL1P22362 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CCL1P22362 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CCL1P22362 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.06■□□□□ 0.32
CCL1P22362 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL1P22362 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.06■□□□□ 0.32
CCL1P22362 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL1P22362 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms