Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRKCAP17252 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
PRKCAP17252 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRKCAP17252 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRKCAP17252 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRKCAP17252 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRKCAP17252 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.33■□□□□ 0.53
PRKCAP17252 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRKCAP17252 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRKCAP17252 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRKCAP17252 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.33■□□□□ 0.52
PRKCAP17252 ID1-201ENST00000376105 1233 ntBASIC18.33■□□□□ 0.52
PRKCAP17252 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.33■□□□□ 0.52
PRKCAP17252 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.33■□□□□ 0.52
PRKCAP17252 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRKCAP17252 C2orf69P4-201ENST00000565394 541 ntBASIC18.33■□□□□ 0.52
PRKCAP17252 AL138781.1-201ENST00000566567 1274 ntBASIC18.33■□□□□ 0.52
PRKCAP17252 MIR4758-201ENST00000577688 71 ntBASIC18.33■□□□□ 0.52
PRKCAP17252 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.33■□□□□ 0.52
PRKCAP17252 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRKCAP17252 DPP3P2-201ENST00000416030 1696 ntBASIC18.33■□□□□ 0.52
PRKCAP17252 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PRKCAP17252 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRKCAP17252 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRKCAP17252 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
PRKCAP17252 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRKCAP17252 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.32■□□□□ 0.52
PRKCAP17252 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRKCAP17252 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRKCAP17252 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PRKCAP17252 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRKCAP17252 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRKCAP17252 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRKCAP17252 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.32■□□□□ 0.52
PRKCAP17252 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PRKCAP17252 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.32■□□□□ 0.52
PRKCAP17252 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.32■□□□□ 0.52
PRKCAP17252 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.32■□□□□ 0.52
PRKCAP17252 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.32■□□□□ 0.52
PRKCAP17252 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.32■□□□□ 0.52
PRKCAP17252 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRKCAP17252 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRKCAP17252 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRKCAP17252 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PRKCAP17252 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PRKCAP17252 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRKCAP17252 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.32■□□□□ 0.52
PRKCAP17252 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRKCAP17252 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRKCAP17252 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.31■□□□□ 0.52
PRKCAP17252 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.31■□□□□ 0.52
PRKCAP17252 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.31■□□□□ 0.52
PRKCAP17252 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRKCAP17252 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRKCAP17252 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRKCAP17252 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRKCAP17252 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PRKCAP17252 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PRKCAP17252 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PRKCAP17252 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.31■□□□□ 0.52
PRKCAP17252 DUSP5P2-201ENST00000426873 1033 ntBASIC18.31■□□□□ 0.52
PRKCAP17252 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.31■□□□□ 0.52
PRKCAP17252 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.31■□□□□ 0.52
PRKCAP17252 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.31■□□□□ 0.52
PRKCAP17252 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PRKCAP17252 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRKCAP17252 AL512408.1-201ENST00000569378 2000 ntBASIC18.31■□□□□ 0.52
PRKCAP17252 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRKCAP17252 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PRKCAP17252 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRKCAP17252 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.31■□□□□ 0.52
PRKCAP17252 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.31■□□□□ 0.52
PRKCAP17252 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRKCAP17252 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRKCAP17252 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRKCAP17252 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRKCAP17252 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.3■□□□□ 0.52
PRKCAP17252 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PRKCAP17252 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRKCAP17252 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRKCAP17252 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.3■□□□□ 0.52
PRKCAP17252 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.3■□□□□ 0.52
PRKCAP17252 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRKCAP17252 SMG8-203ENST00000578922 2178 ntBASIC18.3■□□□□ 0.52
PRKCAP17252 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRKCAP17252 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRKCAP17252 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRKCAP17252 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRKCAP17252 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PRKCAP17252 AC142086.2-201ENST00000569753 217 ntBASIC18.3■□□□□ 0.52
PRKCAP17252 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRKCAP17252 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRKCAP17252 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRKCAP17252 AL162377.1-201ENST00000618844 1793 ntBASIC18.3■□□□□ 0.52
PRKCAP17252 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PRKCAP17252 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
PRKCAP17252 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
PRKCAP17252 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRKCAP17252 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRKCAP17252 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms