Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC130P13994 AL691432.2-201ENST00000607222 2038 ntBASIC21.05■□□□□ 0.96
CCDC130P13994 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC130P13994 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC130P13994 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC130P13994 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC130P13994 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC130P13994 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC130P13994 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC130P13994 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC130P13994 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC130P13994 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC130P13994 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC130P13994 GCSHP5-201ENST00000443090 522 ntBASIC21.04■□□□□ 0.96
CCDC130P13994 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC130P13994 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
CCDC130P13994 AC142381.4-202ENST00000563973 229 ntBASIC21.04■□□□□ 0.96
CCDC130P13994 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC130P13994 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC130P13994 AL121906.2-201ENST00000621597 723 ntBASIC21.04■□□□□ 0.96
CCDC130P13994 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC130P13994 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC130P13994 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CCDC130P13994 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC130P13994 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC130P13994 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC130P13994 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
CCDC130P13994 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC130P13994 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
CCDC130P13994 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC130P13994 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC130P13994 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC130P13994 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC130P13994 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC130P13994 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
CCDC130P13994 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC130P13994 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC130P13994 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC130P13994 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC130P13994 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC130P13994 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC130P13994 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC130P13994 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC130P13994 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC130P13994 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC130P13994 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCDC130P13994 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC130P13994 RPPH1-201ENST00000516869 333 ntBASIC21.03■□□□□ 0.96
CCDC130P13994 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.03■□□□□ 0.96
CCDC130P13994 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC130P13994 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC130P13994 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC130P13994 AL121829.2-201ENST00000620908 328 ntBASIC21.03■□□□□ 0.96
CCDC130P13994 AL359736.2-201ENST00000621992 437 ntBASIC21.03■□□□□ 0.96
CCDC130P13994 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC130P13994 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC130P13994 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC130P13994 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC130P13994 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC130P13994 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC130P13994 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC130P13994 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC130P13994 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CCDC130P13994 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC130P13994 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC130P13994 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
CCDC130P13994 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC130P13994 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC130P13994 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC130P13994 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CCDC130P13994 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC130P13994 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC130P13994 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
CCDC130P13994 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.02■□□□□ 0.96
CCDC130P13994 PHGDH-210ENST00000641115 1638 ntBASIC21.02■□□□□ 0.96
CCDC130P13994 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC130P13994 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC130P13994 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC130P13994 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC130P13994 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC130P13994 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC130P13994 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC130P13994 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
CCDC130P13994 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC130P13994 AC018553.1-201ENST00000616682 1458 ntBASIC21.01■□□□□ 0.95
CCDC130P13994 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC130P13994 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC130P13994 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC130P13994 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC130P13994 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC130P13994 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC130P13994 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC130P13994 AC239809.2-201ENST00000415381 517 ntBASIC21.01■□□□□ 0.95
CCDC130P13994 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CCDC130P13994 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC130P13994 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC130P13994 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC130P13994 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC130P13994 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC130P13994 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms