Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC023632.3-201ENST00000521633 145 ntBASIC18.06■□□□□ 0.48
FREM3P0C091 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FREM3P0C091 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.06■□□□□ 0.48
FREM3P0C091 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
FREM3P0C091 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FREM3P0C091 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.06■□□□□ 0.48
FREM3P0C091 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FREM3P0C091 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FREM3P0C091 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FREM3P0C091 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FREM3P0C091 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FREM3P0C091 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FREM3P0C091 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.06■□□□□ 0.48
FREM3P0C091 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FREM3P0C091 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.05■□□□□ 0.48
FREM3P0C091 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
FREM3P0C091 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FREM3P0C091 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
FREM3P0C091 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.05■□□□□ 0.48
FREM3P0C091 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.05■□□□□ 0.48
FREM3P0C091 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FREM3P0C091 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
FREM3P0C091 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FREM3P0C091 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.05■□□□□ 0.48
FREM3P0C091 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.05■□□□□ 0.48
FREM3P0C091 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
FREM3P0C091 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FREM3P0C091 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.05■□□□□ 0.48
FREM3P0C091 AL031963.3-201ENST00000606441 850 ntBASIC18.05■□□□□ 0.48
FREM3P0C091 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FREM3P0C091 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FREM3P0C091 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FREM3P0C091 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FREM3P0C091 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
FREM3P0C091 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
FREM3P0C091 AC020907.5-201ENST00000624372 1936 ntBASIC18.05■□□□□ 0.48
FREM3P0C091 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
FREM3P0C091 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FREM3P0C091 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FREM3P0C091 AL162377.1-201ENST00000618844 1793 ntBASIC18.05■□□□□ 0.48
FREM3P0C091 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.05■□□□□ 0.48
FREM3P0C091 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
FREM3P0C091 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.05■□□□□ 0.48
FREM3P0C091 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.05■□□□□ 0.48
FREM3P0C091 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FREM3P0C091 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
FREM3P0C091 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.05■□□□□ 0.48
FREM3P0C091 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
FREM3P0C091 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.05■□□□□ 0.48
FREM3P0C091 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.05■□□□□ 0.48
FREM3P0C091 AL121829.2-201ENST00000620908 328 ntBASIC18.05■□□□□ 0.48
FREM3P0C091 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
FREM3P0C091 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FREM3P0C091 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.04■□□□□ 0.48
FREM3P0C091 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FREM3P0C091 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
FREM3P0C091 KRT8P17-201ENST00000453110 1448 ntBASIC18.04■□□□□ 0.48
FREM3P0C091 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
FREM3P0C091 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.04■□□□□ 0.48
FREM3P0C091 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
FREM3P0C091 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FREM3P0C091 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.04■□□□□ 0.48
FREM3P0C091 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FREM3P0C091 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.04■□□□□ 0.48
FREM3P0C091 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
FREM3P0C091 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
FREM3P0C091 AC092720.2-201ENST00000602388 1665 ntBASIC18.04■□□□□ 0.48
FREM3P0C091 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
FREM3P0C091 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
FREM3P0C091 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FREM3P0C091 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FREM3P0C091 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FREM3P0C091 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
FREM3P0C091 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
FREM3P0C091 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.04■□□□□ 0.48
FREM3P0C091 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.04■□□□□ 0.48
FREM3P0C091 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
FREM3P0C091 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
FREM3P0C091 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.04■□□□□ 0.48
FREM3P0C091 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FREM3P0C091 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
FREM3P0C091 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
FREM3P0C091 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.03■□□□□ 0.48
FREM3P0C091 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FREM3P0C091 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.03■□□□□ 0.48
FREM3P0C091 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.03■□□□□ 0.48
FREM3P0C091 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FREM3P0C091 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
FREM3P0C091 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FREM3P0C091 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.03■□□□□ 0.48
FREM3P0C091 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FREM3P0C091 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FREM3P0C091 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
FREM3P0C091 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FREM3P0C091 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
FREM3P0C091 AC099778.1-201ENST00000568593 1911 ntBASIC18.03■□□□□ 0.48
FREM3P0C091 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
FREM3P0C091 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FREM3P0C091 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FREM3P0C091 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms