Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.07■□□□□ 0.8
PDGFBP01127 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDGFBP01127 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDGFBP01127 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.07■□□□□ 0.8
PDGFBP01127 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.07■□□□□ 0.8
PDGFBP01127 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDGFBP01127 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.07■□□□□ 0.8
PDGFBP01127 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.07■□□□□ 0.8
PDGFBP01127 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.07■□□□□ 0.8
PDGFBP01127 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.07■□□□□ 0.8
PDGFBP01127 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.07■□□□□ 0.8
PDGFBP01127 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
PDGFBP01127 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDGFBP01127 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDGFBP01127 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PDGFBP01127 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.06■□□□□ 0.8
PDGFBP01127 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFBP01127 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFBP01127 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFBP01127 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFBP01127 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.06■□□□□ 0.8
PDGFBP01127 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFBP01127 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.06■□□□□ 0.8
PDGFBP01127 FDX1P1-201ENST00000449115 551 ntBASIC20.06■□□□□ 0.8
PDGFBP01127 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFBP01127 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PDGFBP01127 VENTXP5-201ENST00000523979 775 ntBASIC20.06■□□□□ 0.8
PDGFBP01127 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
PDGFBP01127 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFBP01127 AC092338.2-201ENST00000568827 1415 ntBASIC20.06■□□□□ 0.8
PDGFBP01127 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
PDGFBP01127 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
PDGFBP01127 AC010653.2-201ENST00000623505 997 ntBASIC20.06■□□□□ 0.8
PDGFBP01127 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFBP01127 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFBP01127 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFBP01127 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFBP01127 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PDGFBP01127 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFBP01127 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFBP01127 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.05■□□□□ 0.8
PDGFBP01127 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFBP01127 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFBP01127 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFBP01127 SLC25A1P2-201ENST00000430693 912 ntBASIC20.05■□□□□ 0.8
PDGFBP01127 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.05■□□□□ 0.8
PDGFBP01127 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFBP01127 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFBP01127 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.05■□□□□ 0.8
PDGFBP01127 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFBP01127 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.05■□□□□ 0.8
PDGFBP01127 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.05■□□□□ 0.8
PDGFBP01127 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFBP01127 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PDGFBP01127 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFBP01127 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFBP01127 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFBP01127 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFBP01127 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFBP01127 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
PDGFBP01127 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFBP01127 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
PDGFBP01127 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PDGFBP01127 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.04■□□□□ 0.8
PDGFBP01127 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.04■□□□□ 0.8
PDGFBP01127 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.04■□□□□ 0.8
PDGFBP01127 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.04■□□□□ 0.8
PDGFBP01127 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.04■□□□□ 0.8
PDGFBP01127 PRSS44-201ENST00000515154 1146 ntBASIC20.04■□□□□ 0.8
PDGFBP01127 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.04■□□□□ 0.8
PDGFBP01127 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PDGFBP01127 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
PDGFBP01127 GPALPP1-207ENST00000611650 899 ntBASIC20.04■□□□□ 0.8
PDGFBP01127 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFBP01127 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDGFBP01127 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PDGFBP01127 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDGFBP01127 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDGFBP01127 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.03■□□□□ 0.8
PDGFBP01127 KRT8P20-201ENST00000423953 1409 ntBASIC20.03■□□□□ 0.8
PDGFBP01127 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDGFBP01127 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDGFBP01127 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDGFBP01127 AC140113.3-201ENST00000605663 199 ntBASIC20.03■□□□□ 0.8
PDGFBP01127 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.03■□□□□ 0.8
PDGFBP01127 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.03■□□□□ 0.8
PDGFBP01127 AC096733.2-201ENST00000609937 1394 ntBASIC20.03■□□□□ 0.8
PDGFBP01127 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDGFBP01127 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDGFBP01127 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PDGFBP01127 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDGFBP01127 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDGFBP01127 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.02■□□□□ 0.8
PDGFBP01127 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDGFBP01127 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDGFBP01127 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDGFBP01127 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
PDGFBP01127 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDGFBP01127 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.02■□□□□ 0.8
PDGFBP01127 RN7SL510P-201ENST00000581311 263 ntBASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms