Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC22.78■■□□□ 1.24
ALDH1A1P00352 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.78■■□□□ 1.24
ALDH1A1P00352 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
ALDH1A1P00352 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
ALDH1A1P00352 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
ALDH1A1P00352 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
ALDH1A1P00352 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
ALDH1A1P00352 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
ALDH1A1P00352 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
ALDH1A1P00352 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
ALDH1A1P00352 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
ALDH1A1P00352 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
ALDH1A1P00352 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
ALDH1A1P00352 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22.77■■□□□ 1.24
ALDH1A1P00352 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.77■■□□□ 1.24
ALDH1A1P00352 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
ALDH1A1P00352 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.77■■□□□ 1.24
ALDH1A1P00352 AC008622.2-201ENST00000617006 1229 ntBASIC22.77■■□□□ 1.24
ALDH1A1P00352 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC22.77■■□□□ 1.24
ALDH1A1P00352 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.77■■□□□ 1.24
ALDH1A1P00352 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
ALDH1A1P00352 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
ALDH1A1P00352 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.77■■□□□ 1.23
ALDH1A1P00352 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
ALDH1A1P00352 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
ALDH1A1P00352 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.23
ALDH1A1P00352 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ALDH1A1P00352 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.76■■□□□ 1.23
ALDH1A1P00352 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
ALDH1A1P00352 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
ALDH1A1P00352 AC008040.2-201ENST00000461049 708 ntBASIC22.76■■□□□ 1.23
ALDH1A1P00352 AL359075.1-203ENST00000462729 1002 ntBASIC22.76■■□□□ 1.23
ALDH1A1P00352 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
ALDH1A1P00352 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC22.76■■□□□ 1.23
ALDH1A1P00352 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ALDH1A1P00352 AL023803.3-201ENST00000615559 522 ntBASIC22.76■■□□□ 1.23
ALDH1A1P00352 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ALDH1A1P00352 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ALDH1A1P00352 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ALDH1A1P00352 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ALDH1A1P00352 AC116351.2-201ENST00000606540 1585 ntBASIC22.76■■□□□ 1.23
ALDH1A1P00352 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ALDH1A1P00352 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ALDH1A1P00352 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22.75■■□□□ 1.23
ALDH1A1P00352 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.75■■□□□ 1.23
ALDH1A1P00352 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
ALDH1A1P00352 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
ALDH1A1P00352 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ALDH1A1P00352 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC22.75■■□□□ 1.23
ALDH1A1P00352 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC22.75■■□□□ 1.23
ALDH1A1P00352 AL136038.3-201ENST00000561909 1096 ntBASIC22.75■■□□□ 1.23
ALDH1A1P00352 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
ALDH1A1P00352 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
ALDH1A1P00352 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ALDH1A1P00352 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ALDH1A1P00352 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
ALDH1A1P00352 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22.75■■□□□ 1.23
ALDH1A1P00352 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
ALDH1A1P00352 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
ALDH1A1P00352 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.74■■□□□ 1.23
ALDH1A1P00352 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
ALDH1A1P00352 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ALDH1A1P00352 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.74■■□□□ 1.23
ALDH1A1P00352 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ALDH1A1P00352 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ALDH1A1P00352 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.74■■□□□ 1.23
ALDH1A1P00352 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ALDH1A1P00352 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC22.74■■□□□ 1.23
ALDH1A1P00352 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ALDH1A1P00352 AL353719.1-201ENST00000566847 864 ntBASIC22.74■■□□□ 1.23
ALDH1A1P00352 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.74■■□□□ 1.23
ALDH1A1P00352 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
ALDH1A1P00352 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ALDH1A1P00352 TFP1-202ENST00000475455 1573 ntBASIC22.74■■□□□ 1.23
ALDH1A1P00352 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.74■■□□□ 1.23
ALDH1A1P00352 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.74■■□□□ 1.23
ALDH1A1P00352 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC22.74■■□□□ 1.23
ALDH1A1P00352 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ALDH1A1P00352 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
ALDH1A1P00352 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ALDH1A1P00352 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.73■■□□□ 1.23
ALDH1A1P00352 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.73■■□□□ 1.23
ALDH1A1P00352 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC22.73■■□□□ 1.23
ALDH1A1P00352 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC22.73■■□□□ 1.23
ALDH1A1P00352 PRSS44-201ENST00000515154 1146 ntBASIC22.73■■□□□ 1.23
ALDH1A1P00352 PTK2-216ENST00000519881 863 ntTSL 3 BASIC22.73■■□□□ 1.23
ALDH1A1P00352 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC22.73■■□□□ 1.23
ALDH1A1P00352 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC22.73■■□□□ 1.23
ALDH1A1P00352 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.73■■□□□ 1.23
ALDH1A1P00352 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.73■■□□□ 1.23
ALDH1A1P00352 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ALDH1A1P00352 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ALDH1A1P00352 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ALDH1A1P00352 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ALDH1A1P00352 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC22.72■■□□□ 1.23
ALDH1A1P00352 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
ALDH1A1P00352 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC22.72■■□□□ 1.23
ALDH1A1P00352 VENTXP5-201ENST00000523979 775 ntBASIC22.72■■□□□ 1.23
ALDH1A1P00352 CD81-212ENST00000526072 1172 ntTSL 5 BASIC22.72■■□□□ 1.23
ALDH1A1P00352 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 526.8 ms