Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
CLDN1O95832 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN1O95832 AP002982.1-201ENST00000492365 877 ntBASIC17.73■□□□□ 0.43
CLDN1O95832 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
CLDN1O95832 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.73■□□□□ 0.43
CLDN1O95832 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN1O95832 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN1O95832 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN1O95832 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.72■□□□□ 0.43
CLDN1O95832 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN1O95832 AC026471.6-201ENST00000622954 1905 ntBASIC17.72■□□□□ 0.43
CLDN1O95832 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.72■□□□□ 0.43
CLDN1O95832 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN1O95832 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN1O95832 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN1O95832 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.72■□□□□ 0.43
CLDN1O95832 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN1O95832 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CLDN1O95832 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN1O95832 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.72■□□□□ 0.43
CLDN1O95832 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CLDN1O95832 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN1O95832 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.72■□□□□ 0.43
CLDN1O95832 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN1O95832 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDN1O95832 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN1O95832 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDN1O95832 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN1O95832 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN1O95832 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN1O95832 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN1O95832 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN1O95832 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN1O95832 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN1O95832 CRYGFP-201ENST00000418459 633 ntBASIC17.71■□□□□ 0.43
CLDN1O95832 PGM5P4-201ENST00000421970 445 ntBASIC17.71■□□□□ 0.43
CLDN1O95832 LIN28AP1-201ENST00000429574 405 ntBASIC17.71■□□□□ 0.43
CLDN1O95832 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDN1O95832 AC116562.2-201ENST00000507042 360 ntBASIC17.71■□□□□ 0.43
CLDN1O95832 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN1O95832 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CLDN1O95832 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.71■□□□□ 0.43
CLDN1O95832 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN1O95832 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CLDN1O95832 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CLDN1O95832 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDN1O95832 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CLDN1O95832 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDN1O95832 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN1O95832 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN1O95832 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
CLDN1O95832 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN1O95832 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN1O95832 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN1O95832 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.42
CLDN1O95832 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.71■□□□□ 0.42
CLDN1O95832 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN1O95832 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN1O95832 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN1O95832 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN1O95832 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CLDN1O95832 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.7■□□□□ 0.42
CLDN1O95832 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.7■□□□□ 0.42
CLDN1O95832 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN1O95832 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN1O95832 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN1O95832 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN1O95832 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.7■□□□□ 0.42
CLDN1O95832 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN1O95832 ATP5G1P1-201ENST00000448724 379 ntBASIC17.7■□□□□ 0.42
CLDN1O95832 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.7■□□□□ 0.42
CLDN1O95832 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN1O95832 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.7■□□□□ 0.42
CLDN1O95832 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN1O95832 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.7■□□□□ 0.42
CLDN1O95832 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN1O95832 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.7■□□□□ 0.42
CLDN1O95832 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN1O95832 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN1O95832 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN1O95832 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN1O95832 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN1O95832 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN1O95832 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CLDN1O95832 AC124283.5-201ENST00000624661 1809 ntBASIC17.7■□□□□ 0.42
CLDN1O95832 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN1O95832 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN1O95832 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN1O95832 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN1O95832 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN1O95832 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.69■□□□□ 0.42
CLDN1O95832 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN1O95832 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN1O95832 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN1O95832 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN1O95832 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN1O95832 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN1O95832 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN1O95832 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN1O95832 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms