Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ABCA1O95477 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ABCA1O95477 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.62■□□□□ 0.25
ABCA1O95477 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.62■□□□□ 0.25
ABCA1O95477 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.62■□□□□ 0.25
ABCA1O95477 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.62■□□□□ 0.25
ABCA1O95477 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
ABCA1O95477 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ABCA1O95477 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.62■□□□□ 0.25
ABCA1O95477 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ABCA1O95477 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
ABCA1O95477 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ABCA1O95477 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.62■□□□□ 0.25
ABCA1O95477 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ABCA1O95477 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ABCA1O95477 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.61■□□□□ 0.25
ABCA1O95477 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.61■□□□□ 0.25
ABCA1O95477 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.61■□□□□ 0.25
ABCA1O95477 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.61■□□□□ 0.25
ABCA1O95477 AL121906.2-201ENST00000621597 723 ntBASIC16.61■□□□□ 0.25
ABCA1O95477 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.61■□□□□ 0.25
ABCA1O95477 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.61■□□□□ 0.25
ABCA1O95477 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ABCA1O95477 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ABCA1O95477 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ABCA1O95477 LINC01568-207ENST00000641790 1380 ntBASIC16.61■□□□□ 0.25
ABCA1O95477 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ABCA1O95477 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ABCA1O95477 CYP2D8P-201ENST00000433633 1490 ntBASIC16.61■□□□□ 0.25
ABCA1O95477 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ABCA1O95477 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.61■□□□□ 0.25
ABCA1O95477 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ABCA1O95477 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ABCA1O95477 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.61■□□□□ 0.25
ABCA1O95477 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ABCA1O95477 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ABCA1O95477 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ABCA1O95477 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ABCA1O95477 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.6■□□□□ 0.25
ABCA1O95477 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ABCA1O95477 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ABCA1O95477 AC244015.2-201ENST00000616358 1861 ntBASIC16.6■□□□□ 0.25
ABCA1O95477 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ABCA1O95477 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ABCA1O95477 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
ABCA1O95477 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ABCA1O95477 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ABCA1O95477 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ABCA1O95477 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ABCA1O95477 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ABCA1O95477 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.6■□□□□ 0.25
ABCA1O95477 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.6■□□□□ 0.25
ABCA1O95477 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ABCA1O95477 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ABCA1O95477 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.6■□□□□ 0.25
ABCA1O95477 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.59■□□□□ 0.25
ABCA1O95477 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ABCA1O95477 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.59■□□□□ 0.25
ABCA1O95477 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ABCA1O95477 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
ABCA1O95477 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ABCA1O95477 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ABCA1O95477 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ABCA1O95477 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ABCA1O95477 UNC93B2-201ENST00000285383 730 ntBASIC16.59■□□□□ 0.25
ABCA1O95477 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ABCA1O95477 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.59■□□□□ 0.25
ABCA1O95477 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.59■□□□□ 0.25
ABCA1O95477 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.59■□□□□ 0.25
ABCA1O95477 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ABCA1O95477 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.59■□□□□ 0.25
ABCA1O95477 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.59■□□□□ 0.25
ABCA1O95477 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ABCA1O95477 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ABCA1O95477 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ABCA1O95477 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ABCA1O95477 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.59■□□□□ 0.25
ABCA1O95477 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
ABCA1O95477 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
ABCA1O95477 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
ABCA1O95477 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ABCA1O95477 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ABCA1O95477 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ABCA1O95477 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ABCA1O95477 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ABCA1O95477 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
ABCA1O95477 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ABCA1O95477 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ABCA1O95477 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.58■□□□□ 0.25
ABCA1O95477 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.58■□□□□ 0.25
ABCA1O95477 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.58■□□□□ 0.25
ABCA1O95477 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ABCA1O95477 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.58■□□□□ 0.25
ABCA1O95477 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ABCA1O95477 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ABCA1O95477 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ABCA1O95477 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.58■□□□□ 0.25
ABCA1O95477 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ABCA1O95477 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ABCA1O95477 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms