Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIX3O95343 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.39■□□□□ 0.69
SIX3O95343 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIX3O95343 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIX3O95343 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIX3O95343 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIX3O95343 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIX3O95343 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIX3O95343 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.38■□□□□ 0.69
SIX3O95343 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIX3O95343 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SIX3O95343 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SIX3O95343 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.38■□□□□ 0.69
SIX3O95343 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIX3O95343 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SIX3O95343 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SIX3O95343 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIX3O95343 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SIX3O95343 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.38■□□□□ 0.69
SIX3O95343 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.38■□□□□ 0.69
SIX3O95343 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.38■□□□□ 0.69
SIX3O95343 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIX3O95343 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIX3O95343 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIX3O95343 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.37■□□□□ 0.69
SIX3O95343 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX3O95343 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.37■□□□□ 0.69
SIX3O95343 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.37■□□□□ 0.69
SIX3O95343 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.37■□□□□ 0.69
SIX3O95343 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX3O95343 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX3O95343 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX3O95343 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SIX3O95343 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SIX3O95343 AL512625.2-201ENST00000417533 625 ntBASIC19.37■□□□□ 0.69
SIX3O95343 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX3O95343 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.37■□□□□ 0.69
SIX3O95343 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX3O95343 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.37■□□□□ 0.69
SIX3O95343 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX3O95343 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.37■□□□□ 0.69
SIX3O95343 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SIX3O95343 AC005332.7-201ENST00000614046 2005 ntBASIC19.37■□□□□ 0.69
SIX3O95343 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX3O95343 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX3O95343 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.36■□□□□ 0.69
SIX3O95343 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SIX3O95343 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.36■□□□□ 0.69
SIX3O95343 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SIX3O95343 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX3O95343 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
SIX3O95343 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SIX3O95343 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX3O95343 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX3O95343 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIX3O95343 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX3O95343 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.36■□□□□ 0.69
SIX3O95343 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.36■□□□□ 0.69
SIX3O95343 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.36■□□□□ 0.69
SIX3O95343 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX3O95343 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.36■□□□□ 0.69
SIX3O95343 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.36■□□□□ 0.69
SIX3O95343 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.36■□□□□ 0.69
SIX3O95343 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
SIX3O95343 AC080038.1-201ENST00000611274 1154 ntBASIC19.36■□□□□ 0.69
SIX3O95343 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.36■□□□□ 0.69
SIX3O95343 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.36■□□□□ 0.69
SIX3O95343 AC073111.5-205ENST00000641717 521 ntBASIC19.36■□□□□ 0.69
SIX3O95343 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX3O95343 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX3O95343 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.36■□□□□ 0.69
SIX3O95343 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIX3O95343 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX3O95343 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.36■□□□□ 0.69
SIX3O95343 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX3O95343 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX3O95343 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.35■□□□□ 0.69
SIX3O95343 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX3O95343 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX3O95343 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.35■□□□□ 0.69
SIX3O95343 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.35■□□□□ 0.69
SIX3O95343 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SIX3O95343 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX3O95343 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX3O95343 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX3O95343 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SIX3O95343 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.35■□□□□ 0.69
SIX3O95343 HLA-G-202ENST00000376815 851 ntBASIC19.35■□□□□ 0.69
SIX3O95343 HLA-G-203ENST00000376818 1127 ntBASIC19.35■□□□□ 0.69
SIX3O95343 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SIX3O95343 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX3O95343 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.35■□□□□ 0.69
SIX3O95343 AL050303.2-201ENST00000619798 666 ntBASIC19.35■□□□□ 0.69
SIX3O95343 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX3O95343 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX3O95343 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.35■□□□□ 0.69
SIX3O95343 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.35■□□□□ 0.69
SIX3O95343 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SIX3O95343 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SIX3O95343 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms