Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UPK1BO75841 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPK1BO75841 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPK1BO75841 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
UPK1BO75841 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPK1BO75841 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPK1BO75841 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPK1BO75841 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.31■□□□□ 0.36
UPK1BO75841 pRNA.6-201ENST00000610482 90 ntBASIC17.31■□□□□ 0.36
UPK1BO75841 pRNA.5-201ENST00000612139 90 ntBASIC17.31■□□□□ 0.36
UPK1BO75841 pRNA.11-201ENST00000618423 90 ntBASIC17.31■□□□□ 0.36
UPK1BO75841 pRNA.13-201ENST00000619112 90 ntBASIC17.31■□□□□ 0.36
UPK1BO75841 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UPK1BO75841 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UPK1BO75841 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.31■□□□□ 0.36
UPK1BO75841 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
UPK1BO75841 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.31■□□□□ 0.36
UPK1BO75841 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
UPK1BO75841 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPK1BO75841 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.31■□□□□ 0.36
UPK1BO75841 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
UPK1BO75841 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UPK1BO75841 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UPK1BO75841 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.3■□□□□ 0.36
UPK1BO75841 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPK1BO75841 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPK1BO75841 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPK1BO75841 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPK1BO75841 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UPK1BO75841 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.3■□□□□ 0.36
UPK1BO75841 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPK1BO75841 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.3■□□□□ 0.36
UPK1BO75841 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
UPK1BO75841 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPK1BO75841 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPK1BO75841 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.3■□□□□ 0.36
UPK1BO75841 AC241377.3-202ENST00000626088 1088 ntBASIC17.3■□□□□ 0.36
UPK1BO75841 AC241585.3-202ENST00000628937 1088 ntBASIC17.3■□□□□ 0.36
UPK1BO75841 AC245100.8-202ENST00000629247 1058 ntBASIC17.3■□□□□ 0.36
UPK1BO75841 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.3■□□□□ 0.36
UPK1BO75841 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UPK1BO75841 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UPK1BO75841 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.3■□□□□ 0.36
UPK1BO75841 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPK1BO75841 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UPK1BO75841 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UPK1BO75841 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UPK1BO75841 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UPK1BO75841 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UPK1BO75841 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UPK1BO75841 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.29■□□□□ 0.36
UPK1BO75841 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
UPK1BO75841 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.29■□□□□ 0.36
UPK1BO75841 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
UPK1BO75841 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.29■□□□□ 0.36
UPK1BO75841 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UPK1BO75841 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.29■□□□□ 0.36
UPK1BO75841 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.29■□□□□ 0.36
UPK1BO75841 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
UPK1BO75841 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
UPK1BO75841 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UPK1BO75841 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UPK1BO75841 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.29■□□□□ 0.36
UPK1BO75841 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.29■□□□□ 0.36
UPK1BO75841 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UPK1BO75841 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.29■□□□□ 0.36
UPK1BO75841 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
UPK1BO75841 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPK1BO75841 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPK1BO75841 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPK1BO75841 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.28■□□□□ 0.36
UPK1BO75841 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPK1BO75841 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPK1BO75841 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.28■□□□□ 0.36
UPK1BO75841 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
UPK1BO75841 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPK1BO75841 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPK1BO75841 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPK1BO75841 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
UPK1BO75841 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.28■□□□□ 0.36
UPK1BO75841 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.28■□□□□ 0.36
UPK1BO75841 AC137630.3-201ENST00000607245 391 ntBASIC17.28■□□□□ 0.36
UPK1BO75841 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.28■□□□□ 0.36
UPK1BO75841 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPK1BO75841 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPK1BO75841 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPK1BO75841 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPK1BO75841 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPK1BO75841 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.28■□□□□ 0.36
UPK1BO75841 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPK1BO75841 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPK1BO75841 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPK1BO75841 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
UPK1BO75841 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.28■□□□□ 0.36
UPK1BO75841 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
UPK1BO75841 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
UPK1BO75841 RNF126P1-201ENST00000567452 1320 ntBASIC17.27■□□□□ 0.36
UPK1BO75841 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UPK1BO75841 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.27■□□□□ 0.36
UPK1BO75841 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms