Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.16■□□□□ 0.82
PMPCBO75439 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PMPCBO75439 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PMPCBO75439 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PMPCBO75439 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.16■□□□□ 0.82
PMPCBO75439 AL390719.1-204ENST00000412397 1219 ntBASIC20.16■□□□□ 0.82
PMPCBO75439 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.16■□□□□ 0.82
PMPCBO75439 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.16■□□□□ 0.82
PMPCBO75439 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PMPCBO75439 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.16■□□□□ 0.82
PMPCBO75439 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PMPCBO75439 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PMPCBO75439 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PMPCBO75439 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PMPCBO75439 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PMPCBO75439 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.16■□□□□ 0.82
PMPCBO75439 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PMPCBO75439 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PMPCBO75439 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PMPCBO75439 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PMPCBO75439 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.15■□□□□ 0.82
PMPCBO75439 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.15■□□□□ 0.82
PMPCBO75439 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.15■□□□□ 0.82
PMPCBO75439 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PMPCBO75439 AC005829.2-201ENST00000571422 1056 ntBASIC20.15■□□□□ 0.82
PMPCBO75439 AC006557.6-201ENST00000623071 864 ntBASIC20.15■□□□□ 0.82
PMPCBO75439 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PMPCBO75439 AC092368.3-202ENST00000574180 1591 ntBASIC20.15■□□□□ 0.82
PMPCBO75439 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PMPCBO75439 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.15■□□□□ 0.82
PMPCBO75439 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
PMPCBO75439 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.15■□□□□ 0.82
PMPCBO75439 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PMPCBO75439 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.15■□□□□ 0.82
PMPCBO75439 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
PMPCBO75439 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PMPCBO75439 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.15■□□□□ 0.82
PMPCBO75439 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PMPCBO75439 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.14■□□□□ 0.82
PMPCBO75439 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.14■□□□□ 0.81
PMPCBO75439 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PMPCBO75439 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PMPCBO75439 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.14■□□□□ 0.81
PMPCBO75439 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.14■□□□□ 0.81
PMPCBO75439 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PMPCBO75439 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PMPCBO75439 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PMPCBO75439 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.14■□□□□ 0.81
PMPCBO75439 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.14■□□□□ 0.81
PMPCBO75439 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PMPCBO75439 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PMPCBO75439 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PMPCBO75439 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PMPCBO75439 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PMPCBO75439 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PMPCBO75439 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
PMPCBO75439 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PMPCBO75439 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
PMPCBO75439 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PMPCBO75439 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.14■□□□□ 0.81
PMPCBO75439 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
PMPCBO75439 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMPCBO75439 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.13■□□□□ 0.81
PMPCBO75439 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMPCBO75439 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.13■□□□□ 0.81
PMPCBO75439 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMPCBO75439 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMPCBO75439 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PMPCBO75439 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMPCBO75439 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMPCBO75439 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.13■□□□□ 0.81
PMPCBO75439 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PMPCBO75439 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.13■□□□□ 0.81
PMPCBO75439 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMPCBO75439 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PMPCBO75439 HLA-B-256ENST00000639848 1089 ntBASIC20.13■□□□□ 0.81
PMPCBO75439 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMPCBO75439 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMPCBO75439 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.13■□□□□ 0.81
PMPCBO75439 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMPCBO75439 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMPCBO75439 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMPCBO75439 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.12■□□□□ 0.81
PMPCBO75439 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.12■□□□□ 0.81
PMPCBO75439 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMPCBO75439 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.12■□□□□ 0.81
PMPCBO75439 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMPCBO75439 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PMPCBO75439 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMPCBO75439 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PMPCBO75439 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.12■□□□□ 0.81
PMPCBO75439 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.12■□□□□ 0.81
PMPCBO75439 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.12■□□□□ 0.81
PMPCBO75439 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.12■□□□□ 0.81
PMPCBO75439 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.12■□□□□ 0.81
PMPCBO75439 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMPCBO75439 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMPCBO75439 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PMPCBO75439 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PMPCBO75439 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms