Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.81■□□□□ 0.6
SCN2BO60939 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.81■□□□□ 0.6
SCN2BO60939 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.81■□□□□ 0.6
SCN2BO60939 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCN2BO60939 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.81■□□□□ 0.6
SCN2BO60939 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.81■□□□□ 0.6
SCN2BO60939 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN2BO60939 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN2BO60939 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN2BO60939 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.81■□□□□ 0.6
SCN2BO60939 KRT8P20-201ENST00000423953 1409 ntBASIC18.81■□□□□ 0.6
SCN2BO60939 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCN2BO60939 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCN2BO60939 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SCN2BO60939 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.81■□□□□ 0.6
SCN2BO60939 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCN2BO60939 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.8■□□□□ 0.6
SCN2BO60939 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCN2BO60939 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN2BO60939 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN2BO60939 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SCN2BO60939 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN2BO60939 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN2BO60939 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN2BO60939 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCN2BO60939 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.8■□□□□ 0.6
SCN2BO60939 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.8■□□□□ 0.6
SCN2BO60939 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.8■□□□□ 0.6
SCN2BO60939 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.8■□□□□ 0.6
SCN2BO60939 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
SCN2BO60939 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCN2BO60939 AC231657.2-201ENST00000624556 255 ntBASIC18.8■□□□□ 0.6
SCN2BO60939 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.8■□□□□ 0.6
SCN2BO60939 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN2BO60939 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SCN2BO60939 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCN2BO60939 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN2BO60939 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCN2BO60939 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SCN2BO60939 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN2BO60939 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN2BO60939 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.79■□□□□ 0.6
SCN2BO60939 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.79■□□□□ 0.6
SCN2BO60939 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN2BO60939 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN2BO60939 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN2BO60939 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN2BO60939 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCN2BO60939 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.79■□□□□ 0.6
SCN2BO60939 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SCN2BO60939 BID-214ENST00000617586 542 ntTSL 5 BASIC18.79■□□□□ 0.6
SCN2BO60939 KRT16P6-202ENST00000425692 1426 ntBASIC18.79■□□□□ 0.6
SCN2BO60939 AC010980.2-201ENST00000587099 1412 ntBASIC18.79■□□□□ 0.6
SCN2BO60939 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.79■□□□□ 0.6
SCN2BO60939 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN2BO60939 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN2BO60939 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN2BO60939 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN2BO60939 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN2BO60939 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN2BO60939 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.79■□□□□ 0.6
SCN2BO60939 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SCN2BO60939 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.78■□□□□ 0.6
SCN2BO60939 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN2BO60939 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN2BO60939 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.78■□□□□ 0.6
SCN2BO60939 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SCN2BO60939 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN2BO60939 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SCN2BO60939 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.78■□□□□ 0.6
SCN2BO60939 AL162430.1-201ENST00000480705 870 ntBASIC18.78■□□□□ 0.6
SCN2BO60939 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCN2BO60939 AC069236.1-201ENST00000604339 616 ntBASIC18.78■□□□□ 0.6
SCN2BO60939 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.78■□□□□ 0.6
SCN2BO60939 OR10C1-204ENST00000622521 1039 ntBASIC18.78■□□□□ 0.6
SCN2BO60939 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.78■□□□□ 0.6
SCN2BO60939 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN2BO60939 AC087289.5-201ENST00000586076 3175 ntBASIC18.78■□□□□ 0.6
SCN2BO60939 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.78■□□□□ 0.6
SCN2BO60939 BX323043.1-201ENST00000641006 1765 ntBASIC18.78■□□□□ 0.6
SCN2BO60939 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.78■□□□□ 0.6
SCN2BO60939 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SCN2BO60939 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN2BO60939 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN2BO60939 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.77■□□□□ 0.6
SCN2BO60939 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.77■□□□□ 0.6
SCN2BO60939 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN2BO60939 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SCN2BO60939 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN2BO60939 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN2BO60939 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SCN2BO60939 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN2BO60939 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN2BO60939 AC007322.1-201ENST00000426983 750 ntBASIC18.77■□□□□ 0.6
SCN2BO60939 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.77■□□□□ 0.6
SCN2BO60939 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.77■□□□□ 0.6
SCN2BO60939 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.77■□□□□ 0.6
SCN2BO60939 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN2BO60939 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.77■□□□□ 0.6
SCN2BO60939 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms