Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.63■□□□□ 0.57
CTNSO60931 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.63■□□□□ 0.57
CTNSO60931 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CTNSO60931 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.62■□□□□ 0.57
CTNSO60931 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.62■□□□□ 0.57
CTNSO60931 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTNSO60931 AL121906.2-201ENST00000621597 723 ntBASIC18.62■□□□□ 0.57
CTNSO60931 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTNSO60931 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTNSO60931 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTNSO60931 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.62■□□□□ 0.57
CTNSO60931 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.62■□□□□ 0.57
CTNSO60931 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CTNSO60931 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTNSO60931 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNSO60931 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CTNSO60931 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNSO60931 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTNSO60931 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNSO60931 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTNSO60931 AC116351.2-201ENST00000606540 1585 ntBASIC18.61■□□□□ 0.57
CTNSO60931 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTNSO60931 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTNSO60931 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTNSO60931 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.61■□□□□ 0.57
CTNSO60931 AC128676.1-201ENST00000454392 318 ntBASIC18.61■□□□□ 0.57
CTNSO60931 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.61■□□□□ 0.57
CTNSO60931 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTNSO60931 ITM2C-210ENST00000620962 501 ntBASIC18.61■□□□□ 0.57
CTNSO60931 AC073648.6-201ENST00000641589 218 ntBASIC18.61■□□□□ 0.57
CTNSO60931 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNSO60931 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNSO60931 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CTNSO60931 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNSO60931 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNSO60931 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.61■□□□□ 0.57
CTNSO60931 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTNSO60931 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTNSO60931 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNSO60931 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CTNSO60931 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTNSO60931 TCF3P1-201ENST00000423021 1937 ntBASIC18.61■□□□□ 0.57
CTNSO60931 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CTNSO60931 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNSO60931 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNSO60931 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNSO60931 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CTNSO60931 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTNSO60931 ABHD17AP1-201ENST00000358206 933 ntBASIC18.6■□□□□ 0.57
CTNSO60931 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNSO60931 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNSO60931 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNSO60931 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.6■□□□□ 0.57
CTNSO60931 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNSO60931 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.6■□□□□ 0.57
CTNSO60931 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.6■□□□□ 0.57
CTNSO60931 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTNSO60931 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.6■□□□□ 0.57
CTNSO60931 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNSO60931 AC069544.1-201ENST00000609399 999 ntBASIC18.6■□□□□ 0.57
CTNSO60931 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNSO60931 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.6■□□□□ 0.57
CTNSO60931 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.6■□□□□ 0.57
CTNSO60931 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.6■□□□□ 0.57
CTNSO60931 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.6■□□□□ 0.57
CTNSO60931 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNSO60931 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CTNSO60931 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
CTNSO60931 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTNSO60931 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTNSO60931 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.59■□□□□ 0.57
CTNSO60931 AC018553.1-201ENST00000616682 1458 ntBASIC18.59■□□□□ 0.57
CTNSO60931 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.59■□□□□ 0.57
CTNSO60931 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTNSO60931 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTNSO60931 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
CTNSO60931 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNSO60931 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNSO60931 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNSO60931 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTNSO60931 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNSO60931 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNSO60931 KRT18P29-201ENST00000397031 1267 ntBASIC18.59■□□□□ 0.57
CTNSO60931 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.59■□□□□ 0.57
CTNSO60931 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.59■□□□□ 0.57
CTNSO60931 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.59■□□□□ 0.57
CTNSO60931 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.59■□□□□ 0.57
CTNSO60931 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTNSO60931 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNSO60931 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNSO60931 AP001271.2-201ENST00000624018 1556 ntBASIC18.59■□□□□ 0.57
CTNSO60931 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CTNSO60931 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CTNSO60931 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.59■□□□□ 0.57
CTNSO60931 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNSO60931 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNSO60931 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTNSO60931 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
CTNSO60931 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.58■□□□□ 0.57
CTNSO60931 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms