Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 AL390719.1-204ENST00000412397 1219 ntBASIC18.63■□□□□ 0.57
PRAMEF2O60811 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.63■□□□□ 0.57
PRAMEF2O60811 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF2O60811 AC008550.1-201ENST00000511500 884 ntBASIC18.63■□□□□ 0.57
PRAMEF2O60811 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.63■□□□□ 0.57
PRAMEF2O60811 AC233263.1-201ENST00000578059 224 ntBASIC18.63■□□□□ 0.57
PRAMEF2O60811 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.63■□□□□ 0.57
PRAMEF2O60811 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF2O60811 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF2O60811 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.63■□□□□ 0.57
PRAMEF2O60811 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF2O60811 KRT16P6-202ENST00000425692 1426 ntBASIC18.63■□□□□ 0.57
PRAMEF2O60811 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.63■□□□□ 0.57
PRAMEF2O60811 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF2O60811 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF2O60811 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PRAMEF2O60811 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PRAMEF2O60811 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF2O60811 BX119927.1-201ENST00000636596 1552 ntBASIC18.63■□□□□ 0.57
PRAMEF2O60811 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PRAMEF2O60811 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PRAMEF2O60811 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF2O60811 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.63■□□□□ 0.57
PRAMEF2O60811 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PRAMEF2O60811 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF2O60811 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF2O60811 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
PRAMEF2O60811 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF2O60811 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF2O60811 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PRAMEF2O60811 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.62■□□□□ 0.57
PRAMEF2O60811 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF2O60811 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PRAMEF2O60811 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.62■□□□□ 0.57
PRAMEF2O60811 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.62■□□□□ 0.57
PRAMEF2O60811 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PRAMEF2O60811 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.62■□□□□ 0.57
PRAMEF2O60811 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PRAMEF2O60811 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
PRAMEF2O60811 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF2O60811 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF2O60811 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.62■□□□□ 0.57
PRAMEF2O60811 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PRAMEF2O60811 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.62■□□□□ 0.57
PRAMEF2O60811 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PRAMEF2O60811 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF2O60811 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF2O60811 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF2O60811 AC099778.1-201ENST00000568593 1911 ntBASIC18.62■□□□□ 0.57
PRAMEF2O60811 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF2O60811 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
PRAMEF2O60811 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF2O60811 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.62■□□□□ 0.57
PRAMEF2O60811 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF2O60811 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PRAMEF2O60811 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PRAMEF2O60811 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF2O60811 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF2O60811 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF2O60811 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.61■□□□□ 0.57
PRAMEF2O60811 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF2O60811 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.61■□□□□ 0.57
PRAMEF2O60811 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.61■□□□□ 0.57
PRAMEF2O60811 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.61■□□□□ 0.57
PRAMEF2O60811 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PRAMEF2O60811 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.61■□□□□ 0.57
PRAMEF2O60811 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF2O60811 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF2O60811 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF2O60811 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF2O60811 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.61■□□□□ 0.57
PRAMEF2O60811 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.61■□□□□ 0.57
PRAMEF2O60811 AL596275.1-201ENST00000423464 877 ntBASIC18.61■□□□□ 0.57
PRAMEF2O60811 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF2O60811 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.61■□□□□ 0.57
PRAMEF2O60811 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PRAMEF2O60811 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.61■□□□□ 0.57
PRAMEF2O60811 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.61■□□□□ 0.57
PRAMEF2O60811 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.61■□□□□ 0.57
PRAMEF2O60811 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF2O60811 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF2O60811 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF2O60811 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEF2O60811 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.6■□□□□ 0.57
PRAMEF2O60811 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF2O60811 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF2O60811 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.6■□□□□ 0.57
PRAMEF2O60811 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF2O60811 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
PRAMEF2O60811 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEF2O60811 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PRAMEF2O60811 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEF2O60811 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF2O60811 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.6■□□□□ 0.57
PRAMEF2O60811 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEF2O60811 AC005829.2-201ENST00000571422 1056 ntBASIC18.6■□□□□ 0.57
PRAMEF2O60811 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.6■□□□□ 0.57
PRAMEF2O60811 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF2O60811 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.6■□□□□ 0.57
PRAMEF2O60811 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms