Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA12O60330 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA12O60330 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA12O60330 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PCDHGA12O60330 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA12O60330 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA12O60330 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHGA12O60330 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PCDHGA12O60330 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCDHGA12O60330 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA12O60330 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.69■□□□□ 0.74
PCDHGA12O60330 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.69■□□□□ 0.74
PCDHGA12O60330 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.69■□□□□ 0.74
PCDHGA12O60330 AC011484.1-201ENST00000377652 1995 ntBASIC19.69■□□□□ 0.74
PCDHGA12O60330 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PCDHGA12O60330 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA12O60330 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDHGA12O60330 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA12O60330 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHGA12O60330 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA12O60330 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHGA12O60330 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA12O60330 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHGA12O60330 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA12O60330 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA12O60330 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA12O60330 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA12O60330 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA12O60330 TMPOP1-202ENST00000424642 1267 ntBASIC19.68■□□□□ 0.74
PCDHGA12O60330 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCDHGA12O60330 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
PCDHGA12O60330 AC073195.1-201ENST00000607241 877 ntBASIC19.68■□□□□ 0.74
PCDHGA12O60330 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGA12O60330 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGA12O60330 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGA12O60330 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA12O60330 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA12O60330 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCDHGA12O60330 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA12O60330 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
PCDHGA12O60330 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA12O60330 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGA12O60330 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA12O60330 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PCDHGA12O60330 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA12O60330 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA12O60330 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA12O60330 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA12O60330 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PCDHGA12O60330 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGA12O60330 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PCDHGA12O60330 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGA12O60330 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGA12O60330 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGA12O60330 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA12O60330 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA12O60330 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA12O60330 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PCDHGA12O60330 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA12O60330 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGA12O60330 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA12O60330 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA12O60330 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA12O60330 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA12O60330 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA12O60330 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA12O60330 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA12O60330 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
PCDHGA12O60330 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA12O60330 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA12O60330 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA12O60330 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PCDHGA12O60330 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHGA12O60330 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.66■□□□□ 0.74
PCDHGA12O60330 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDHGA12O60330 AL121906.2-201ENST00000621597 723 ntBASIC19.66■□□□□ 0.74
PCDHGA12O60330 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGA12O60330 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGA12O60330 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PCDHGA12O60330 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PCDHGA12O60330 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA12O60330 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA12O60330 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PCDHGA12O60330 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PCDHGA12O60330 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA12O60330 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA12O60330 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGA12O60330 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGA12O60330 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA12O60330 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA12O60330 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGA12O60330 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA12O60330 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA12O60330 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA12O60330 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCDHGA12O60330 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA12O60330 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA12O60330 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA12O60330 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA12O60330 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms