Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSSCA1O60232 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.17■□□□□ 0.18
SSSCA1O60232 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.17■□□□□ 0.18
SSSCA1O60232 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SSSCA1O60232 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSSCA1O60232 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
SSSCA1O60232 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSSCA1O60232 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSSCA1O60232 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSSCA1O60232 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.17■□□□□ 0.18
SSSCA1O60232 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSSCA1O60232 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSSCA1O60232 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSSCA1O60232 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSSCA1O60232 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.17■□□□□ 0.18
SSSCA1O60232 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SSSCA1O60232 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SSSCA1O60232 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.17■□□□□ 0.18
SSSCA1O60232 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.17■□□□□ 0.18
SSSCA1O60232 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSSCA1O60232 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSSCA1O60232 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SSSCA1O60232 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSSCA1O60232 KRT87P-202ENST00000534226 1464 ntBASIC16.16■□□□□ 0.18
SSSCA1O60232 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.16■□□□□ 0.18
SSSCA1O60232 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.16■□□□□ 0.18
SSSCA1O60232 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSSCA1O60232 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSSCA1O60232 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.16■□□□□ 0.18
SSSCA1O60232 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SSSCA1O60232 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSSCA1O60232 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SSSCA1O60232 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSSCA1O60232 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSSCA1O60232 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSSCA1O60232 AL136116.3-201ENST00000402907 1138 ntBASIC16.16■□□□□ 0.18
SSSCA1O60232 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.16■□□□□ 0.18
SSSCA1O60232 AL136162.1-201ENST00000607711 1078 ntBASIC16.16■□□□□ 0.18
SSSCA1O60232 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSSCA1O60232 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.16■□□□□ 0.18
SSSCA1O60232 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSSCA1O60232 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SSSCA1O60232 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSSCA1O60232 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.16■□□□□ 0.18
SSSCA1O60232 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.16■□□□□ 0.18
SSSCA1O60232 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.16■□□□□ 0.18
SSSCA1O60232 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSSCA1O60232 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.15■□□□□ 0.18
SSSCA1O60232 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSSCA1O60232 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.15■□□□□ 0.18
SSSCA1O60232 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.15■□□□□ 0.18
SSSCA1O60232 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.15■□□□□ 0.18
SSSCA1O60232 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SSSCA1O60232 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SSSCA1O60232 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSSCA1O60232 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSSCA1O60232 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.15■□□□□ 0.18
SSSCA1O60232 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSSCA1O60232 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SSSCA1O60232 MIR572-201ENST00000384983 95 ntBASIC16.15■□□□□ 0.18
SSSCA1O60232 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SSSCA1O60232 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.15■□□□□ 0.18
SSSCA1O60232 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
SSSCA1O60232 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSSCA1O60232 AC027682.1-201ENST00000562846 899 ntBASIC16.15■□□□□ 0.18
SSSCA1O60232 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.15■□□□□ 0.18
SSSCA1O60232 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.15■□□□□ 0.18
SSSCA1O60232 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
SSSCA1O60232 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSSCA1O60232 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.15■□□□□ 0.18
SSSCA1O60232 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSSCA1O60232 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSSCA1O60232 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSSCA1O60232 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.15■□□□□ 0.18
SSSCA1O60232 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSSCA1O60232 AC135279.3-201ENST00000610945 1311 ntBASIC16.15■□□□□ 0.18
SSSCA1O60232 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSSCA1O60232 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
SSSCA1O60232 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.15■□□□□ 0.18
SSSCA1O60232 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSSCA1O60232 AL032819.2-201ENST00000624543 2162 ntBASIC16.14■□□□□ 0.17
SSSCA1O60232 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.14■□□□□ 0.17
SSSCA1O60232 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SSSCA1O60232 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSSCA1O60232 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
SSSCA1O60232 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSSCA1O60232 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSSCA1O60232 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSSCA1O60232 LINC01465-201ENST00000408887 1940 ntBASIC16.14■□□□□ 0.17
SSSCA1O60232 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSSCA1O60232 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.14■□□□□ 0.17
SSSCA1O60232 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.14■□□□□ 0.17
SSSCA1O60232 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSSCA1O60232 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SSSCA1O60232 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSSCA1O60232 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSSCA1O60232 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.14■□□□□ 0.17
SSSCA1O60232 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSSCA1O60232 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSSCA1O60232 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms