Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.24■□□□□ 0.35
XRCC2O43543 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.24■□□□□ 0.35
XRCC2O43543 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC2O43543 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.24■□□□□ 0.35
XRCC2O43543 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC2O43543 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.24■□□□□ 0.35
XRCC2O43543 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.24■□□□□ 0.35
XRCC2O43543 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
XRCC2O43543 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.23■□□□□ 0.35
XRCC2O43543 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
XRCC2O43543 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
XRCC2O43543 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
XRCC2O43543 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
XRCC2O43543 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.23■□□□□ 0.35
XRCC2O43543 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.23■□□□□ 0.35
XRCC2O43543 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
XRCC2O43543 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
XRCC2O43543 SLC29A4P1-201ENST00000398760 971 ntBASIC17.23■□□□□ 0.35
XRCC2O43543 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.23■□□□□ 0.35
XRCC2O43543 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
XRCC2O43543 AC083906.2-201ENST00000511578 360 ntBASIC17.23■□□□□ 0.35
XRCC2O43543 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
XRCC2O43543 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
XRCC2O43543 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.23■□□□□ 0.35
XRCC2O43543 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
XRCC2O43543 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
XRCC2O43543 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
XRCC2O43543 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
XRCC2O43543 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.23■□□□□ 0.35
XRCC2O43543 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
XRCC2O43543 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
XRCC2O43543 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
XRCC2O43543 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
XRCC2O43543 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
XRCC2O43543 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
XRCC2O43543 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
XRCC2O43543 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
XRCC2O43543 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
XRCC2O43543 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
XRCC2O43543 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
XRCC2O43543 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
XRCC2O43543 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
XRCC2O43543 GPX1P1-201ENST00000388829 606 ntBASIC17.22■□□□□ 0.35
XRCC2O43543 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.22■□□□□ 0.35
XRCC2O43543 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
XRCC2O43543 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
XRCC2O43543 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.22■□□□□ 0.35
XRCC2O43543 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
XRCC2O43543 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.22■□□□□ 0.35
XRCC2O43543 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
XRCC2O43543 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
XRCC2O43543 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
XRCC2O43543 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
XRCC2O43543 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
XRCC2O43543 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
XRCC2O43543 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
XRCC2O43543 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
XRCC2O43543 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.21■□□□□ 0.35
XRCC2O43543 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
XRCC2O43543 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
XRCC2O43543 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.21■□□□□ 0.35
XRCC2O43543 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
XRCC2O43543 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
XRCC2O43543 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
XRCC2O43543 MIPEPP3-201ENST00000412105 444 ntBASIC17.21■□□□□ 0.35
XRCC2O43543 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.21■□□□□ 0.35
XRCC2O43543 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.21■□□□□ 0.35
XRCC2O43543 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
XRCC2O43543 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
XRCC2O43543 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
XRCC2O43543 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
XRCC2O43543 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
XRCC2O43543 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
XRCC2O43543 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.21■□□□□ 0.35
XRCC2O43543 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
XRCC2O43543 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
XRCC2O43543 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.21■□□□□ 0.34
XRCC2O43543 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
XRCC2O43543 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
XRCC2O43543 AC009237.14-201ENST00000609975 1594 ntBASIC17.2■□□□□ 0.34
XRCC2O43543 AP001271.2-201ENST00000624018 1556 ntBASIC17.2■□□□□ 0.34
XRCC2O43543 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
XRCC2O43543 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
XRCC2O43543 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
XRCC2O43543 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
XRCC2O43543 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
XRCC2O43543 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
XRCC2O43543 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.2■□□□□ 0.34
XRCC2O43543 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
XRCC2O43543 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.2■□□□□ 0.34
XRCC2O43543 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.2■□□□□ 0.34
XRCC2O43543 NCF1B-203ENST00000435988 1254 ntBASIC17.2■□□□□ 0.34
XRCC2O43543 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.2■□□□□ 0.34
XRCC2O43543 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.2■□□□□ 0.34
XRCC2O43543 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.2■□□□□ 0.34
XRCC2O43543 AC092118.2-201ENST00000613495 667 ntBASIC17.2■□□□□ 0.34
XRCC2O43543 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.2■□□□□ 0.34
XRCC2O43543 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
XRCC2O43543 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
XRCC2O43543 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms