Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.98■□□□□ 0.47
SMAD9O15198 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD9O15198 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD9O15198 AC092368.3-202ENST00000574180 1591 ntBASIC17.98■□□□□ 0.47
SMAD9O15198 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD9O15198 GABARAPL3-202ENST00000624044 1851 ntBASIC17.98■□□□□ 0.47
SMAD9O15198 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD9O15198 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD9O15198 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD9O15198 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD9O15198 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.98■□□□□ 0.47
SMAD9O15198 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD9O15198 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD9O15198 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.98■□□□□ 0.47
SMAD9O15198 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD9O15198 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD9O15198 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.98■□□□□ 0.47
SMAD9O15198 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SMAD9O15198 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD9O15198 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD9O15198 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD9O15198 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SMAD9O15198 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
SMAD9O15198 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.97■□□□□ 0.47
SMAD9O15198 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD9O15198 CD99P1-205ENST00000527459 561 ntBASIC17.97■□□□□ 0.47
SMAD9O15198 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SMAD9O15198 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD9O15198 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD9O15198 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.97■□□□□ 0.47
SMAD9O15198 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD9O15198 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD9O15198 SMG8-203ENST00000578922 2178 ntBASIC17.97■□□□□ 0.47
SMAD9O15198 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SMAD9O15198 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD9O15198 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD9O15198 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD9O15198 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD9O15198 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.96■□□□□ 0.47
SMAD9O15198 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.96■□□□□ 0.47
SMAD9O15198 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.96■□□□□ 0.47
SMAD9O15198 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.96■□□□□ 0.47
SMAD9O15198 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.96■□□□□ 0.47
SMAD9O15198 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.96■□□□□ 0.47
SMAD9O15198 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMAD9O15198 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.96■□□□□ 0.47
SMAD9O15198 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMAD9O15198 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMAD9O15198 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMAD9O15198 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMAD9O15198 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.96■□□□□ 0.47
SMAD9O15198 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMAD9O15198 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SMAD9O15198 PNMA6B-201ENST00000538162 1200 ntBASIC17.96■□□□□ 0.47
SMAD9O15198 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMAD9O15198 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SMAD9O15198 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.96■□□□□ 0.47
SMAD9O15198 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.96■□□□□ 0.47
SMAD9O15198 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.96■□□□□ 0.47
SMAD9O15198 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.96■□□□□ 0.47
SMAD9O15198 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.96■□□□□ 0.47
SMAD9O15198 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMAD9O15198 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.95■□□□□ 0.46
SMAD9O15198 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
SMAD9O15198 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD9O15198 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.95■□□□□ 0.46
SMAD9O15198 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.95■□□□□ 0.46
SMAD9O15198 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD9O15198 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD9O15198 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.95■□□□□ 0.46
SMAD9O15198 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD9O15198 AC023632.3-201ENST00000521633 145 ntBASIC17.95■□□□□ 0.46
SMAD9O15198 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.95■□□□□ 0.46
SMAD9O15198 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.95■□□□□ 0.46
SMAD9O15198 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD9O15198 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD9O15198 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD9O15198 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD9O15198 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD9O15198 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.95■□□□□ 0.46
SMAD9O15198 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD9O15198 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SMAD9O15198 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SMAD9O15198 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD9O15198 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.94■□□□□ 0.46
SMAD9O15198 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMAD9O15198 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMAD9O15198 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMAD9O15198 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMAD9O15198 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMAD9O15198 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMAD9O15198 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMAD9O15198 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.94■□□□□ 0.46
SMAD9O15198 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.94■□□□□ 0.46
SMAD9O15198 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.94■□□□□ 0.46
SMAD9O15198 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMAD9O15198 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.94■□□□□ 0.46
SMAD9O15198 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.94■□□□□ 0.46
SMAD9O15198 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMAD9O15198 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms