Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.05
CHD2O14647 AC026396.1-201ENST00000419388 421 ntBASIC27.83■■■□□ 2.05
CHD2O14647 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC27.83■■■□□ 2.05
CHD2O14647 AL671277.2-201ENST00000458060 996 ntBASIC27.83■■■□□ 2.05
CHD2O14647 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC27.83■■■□□ 2.05
CHD2O14647 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC27.83■■■□□ 2.05
CHD2O14647 CLEC4GP1-201ENST00000596555 870 ntBASIC27.83■■■□□ 2.05
CHD2O14647 AC116562.4-202ENST00000641738 218 ntBASIC27.83■■■□□ 2.05
CHD2O14647 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
CHD2O14647 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC27.83■■■□□ 2.05
CHD2O14647 STK25-204ENST00000405585 1643 ntTSL 2 BASIC27.83■■■□□ 2.05
CHD2O14647 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CHD2O14647 AC004951.3-201ENST00000418645 1148 ntBASIC27.83■■■□□ 2.05
CHD2O14647 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CHD2O14647 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC27.83■■■□□ 2.05
CHD2O14647 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC27.83■■■□□ 2.05
CHD2O14647 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC27.83■■■□□ 2.05
CHD2O14647 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC27.83■■■□□ 2.05
CHD2O14647 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CHD2O14647 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC27.83■■■□□ 2.05
CHD2O14647 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC27.83■■■□□ 2.04
CHD2O14647 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC27.82■■■□□ 2.04
CHD2O14647 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CHD2O14647 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC27.82■■■□□ 2.04
CHD2O14647 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CHD2O14647 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
CHD2O14647 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CHD2O14647 PP7080-204ENST00000510714 601 ntTSL 3 BASIC27.82■■■□□ 2.04
CHD2O14647 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
CHD2O14647 GOLGA6L3-201ENST00000507199 1679 ntBASIC27.82■■■□□ 2.04
CHD2O14647 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CHD2O14647 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CHD2O14647 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CHD2O14647 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CHD2O14647 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CHD2O14647 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CHD2O14647 TUBB8P6-201ENST00000436895 1288 ntBASIC27.81■■■□□ 2.04
CHD2O14647 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CHD2O14647 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC27.81■■■□□ 2.04
CHD2O14647 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
CHD2O14647 AC130371.2-201ENST00000619443 611 ntBASIC27.81■■■□□ 2.04
CHD2O14647 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CHD2O14647 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC27.81■■■□□ 2.04
CHD2O14647 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
CHD2O14647 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CHD2O14647 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CHD2O14647 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC27.81■■■□□ 2.04
CHD2O14647 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC27.81■■■□□ 2.04
CHD2O14647 AC011558.1-201ENST00000623459 338 ntBASIC27.81■■■□□ 2.04
CHD2O14647 HLA-A-209ENST00000638375 975 ntBASIC27.81■■■□□ 2.04
CHD2O14647 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC27.81■■■□□ 2.04
CHD2O14647 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC27.8■■■□□ 2.04
CHD2O14647 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
CHD2O14647 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
CHD2O14647 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CHD2O14647 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CHD2O14647 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
CHD2O14647 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CHD2O14647 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
CHD2O14647 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
CHD2O14647 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC27.8■■■□□ 2.04
CHD2O14647 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CHD2O14647 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CHD2O14647 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CHD2O14647 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
CHD2O14647 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CHD2O14647 SLC25A1P2-201ENST00000430693 912 ntBASIC27.79■■■□□ 2.04
CHD2O14647 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CHD2O14647 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC27.79■■■□□ 2.04
CHD2O14647 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CHD2O14647 AL441883.1-201ENST00000566170 1045 ntBASIC27.79■■■□□ 2.04
CHD2O14647 VPS72-207ENST00000640458 689 ntTSL 5 BASIC27.79■■■□□ 2.04
CHD2O14647 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CHD2O14647 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CHD2O14647 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CHD2O14647 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CHD2O14647 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CHD2O14647 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CHD2O14647 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC27.78■■■□□ 2.04
CHD2O14647 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC27.78■■■□□ 2.04
CHD2O14647 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC27.78■■■□□ 2.04
CHD2O14647 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CHD2O14647 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC27.78■■■□□ 2.04
CHD2O14647 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
CHD2O14647 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CHD2O14647 KRT18P38-201ENST00000449496 1282 ntBASIC27.78■■■□□ 2.04
CHD2O14647 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC27.78■■■□□ 2.04
CHD2O14647 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC27.78■■■□□ 2.04
CHD2O14647 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CHD2O14647 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC27.78■■■□□ 2.04
CHD2O14647 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC27.77■■■□□ 2.04
CHD2O14647 AC092338.2-201ENST00000568827 1415 ntBASIC27.77■■■□□ 2.04
CHD2O14647 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CHD2O14647 AC008040.2-201ENST00000461049 708 ntBASIC27.77■■■□□ 2.04
CHD2O14647 AL023803.3-201ENST00000615559 522 ntBASIC27.77■■■□□ 2.04
CHD2O14647 AC012313.10-201ENST00000623509 926 ntBASIC27.77■■■□□ 2.04
CHD2O14647 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
CHD2O14647 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CHD2O14647 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.77■■■□□ 2.04
CHD2O14647 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms