Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.92■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.92■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.91■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.91■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.91■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.91■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.91■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.91■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 AC018553.1-201ENST00000616682 1458 ntBASIC19.91■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.91■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 AC073195.1-201ENST00000607241 877 ntBASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 TFP1-202ENST00000475455 1573 ntBASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.9■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.89■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.89■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.89■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.89■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.89■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.89■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.88■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.88■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.88■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 YBX1P10-201ENST00000444752 975 ntBASIC19.88■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 CD177P1-201ENST00000606252 935 ntBASIC19.88■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 AL353708.3-201ENST00000610272 989 ntBASIC19.88■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 AC073912.3-201ENST00000624414 853 ntBASIC19.88■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.88■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 AC020907.5-201ENST00000624372 1936 ntBASIC19.88■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 AIRN-201ENST00000601203 4374 ntBASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms