Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.7■□□□□ 0.42
TVP23AA6NH52 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TVP23AA6NH52 KRT8P17-201ENST00000453110 1448 ntBASIC17.7■□□□□ 0.42
TVP23AA6NH52 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TVP23AA6NH52 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TVP23AA6NH52 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
TVP23AA6NH52 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TVP23AA6NH52 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TVP23AA6NH52 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TVP23AA6NH52 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TVP23AA6NH52 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TVP23AA6NH52 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TVP23AA6NH52 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TVP23AA6NH52 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.69■□□□□ 0.42
TVP23AA6NH52 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TVP23AA6NH52 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TVP23AA6NH52 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.69■□□□□ 0.42
TVP23AA6NH52 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TVP23AA6NH52 AC100791.3-201ENST00000617619 330 ntBASIC17.69■□□□□ 0.42
TVP23AA6NH52 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TVP23AA6NH52 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TVP23AA6NH52 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TVP23AA6NH52 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TVP23AA6NH52 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TVP23AA6NH52 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TVP23AA6NH52 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TVP23AA6NH52 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TVP23AA6NH52 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TVP23AA6NH52 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.68■□□□□ 0.42
TVP23AA6NH52 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TVP23AA6NH52 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TVP23AA6NH52 AC120498.9-201ENST00000339021 3867 ntBASIC17.68■□□□□ 0.42
TVP23AA6NH52 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.68■□□□□ 0.42
TVP23AA6NH52 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TVP23AA6NH52 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TVP23AA6NH52 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TVP23AA6NH52 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TVP23AA6NH52 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.68■□□□□ 0.42
TVP23AA6NH52 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TVP23AA6NH52 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TVP23AA6NH52 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.68■□□□□ 0.42
TVP23AA6NH52 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TVP23AA6NH52 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TVP23AA6NH52 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.68■□□□□ 0.42
TVP23AA6NH52 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.68■□□□□ 0.42
TVP23AA6NH52 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.68■□□□□ 0.42
TVP23AA6NH52 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.68■□□□□ 0.42
TVP23AA6NH52 BID-214ENST00000617586 542 ntTSL 5 BASIC17.68■□□□□ 0.42
TVP23AA6NH52 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.68■□□□□ 0.42
TVP23AA6NH52 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TVP23AA6NH52 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TVP23AA6NH52 TREX1-205ENST00000625293 1783 ntBASIC17.68■□□□□ 0.42
TVP23AA6NH52 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
TVP23AA6NH52 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TVP23AA6NH52 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TVP23AA6NH52 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TVP23AA6NH52 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TVP23AA6NH52 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TVP23AA6NH52 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TVP23AA6NH52 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.67■□□□□ 0.42
TVP23AA6NH52 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TVP23AA6NH52 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.67■□□□□ 0.42
TVP23AA6NH52 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TVP23AA6NH52 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TVP23AA6NH52 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TVP23AA6NH52 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.67■□□□□ 0.42
TVP23AA6NH52 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TVP23AA6NH52 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.67■□□□□ 0.42
TVP23AA6NH52 AL162430.1-201ENST00000480705 870 ntBASIC17.67■□□□□ 0.42
TVP23AA6NH52 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.67■□□□□ 0.42
TVP23AA6NH52 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TVP23AA6NH52 CYP2T3P-201ENST00000601990 817 ntBASIC17.67■□□□□ 0.42
TVP23AA6NH52 AC069236.1-201ENST00000604339 616 ntBASIC17.67■□□□□ 0.42
TVP23AA6NH52 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.67■□□□□ 0.42
TVP23AA6NH52 AC008694.1-202ENST00000636953 945 ntBASIC17.67■□□□□ 0.42
TVP23AA6NH52 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.67■□□□□ 0.42
TVP23AA6NH52 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.67■□□□□ 0.42
TVP23AA6NH52 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.67■□□□□ 0.42
TVP23AA6NH52 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TVP23AA6NH52 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TVP23AA6NH52 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TVP23AA6NH52 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TVP23AA6NH52 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TVP23AA6NH52 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
TVP23AA6NH52 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TVP23AA6NH52 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TVP23AA6NH52 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.66■□□□□ 0.42
TVP23AA6NH52 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.66■□□□□ 0.42
TVP23AA6NH52 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.66■□□□□ 0.42
TVP23AA6NH52 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TVP23AA6NH52 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TVP23AA6NH52 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.66■□□□□ 0.42
TVP23AA6NH52 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TVP23AA6NH52 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TVP23AA6NH52 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.66■□□□□ 0.42
TVP23AA6NH52 AC007322.1-201ENST00000426983 750 ntBASIC17.66■□□□□ 0.42
TVP23AA6NH52 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.66■□□□□ 0.42
TVP23AA6NH52 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.66■□□□□ 0.42
TVP23AA6NH52 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.66■□□□□ 0.42
TVP23AA6NH52 AL031963.3-201ENST00000606441 850 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms