Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 HES6-204ENST00000409182 863 ntTSL 2 BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 AL117332.1-201ENST00000622628 974 ntBASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 MIR2861-201ENST00000636310 90 ntBASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.66■□□□□ 0.1
RBFOX3A6NFN3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RBFOX3A6NFN3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RBFOX3A6NFN3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.66■□□□□ 0.1
RBFOX3A6NFN3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RBFOX3A6NFN3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RBFOX3A6NFN3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.66■□□□□ 0.1
RBFOX3A6NFN3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RBFOX3A6NFN3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RBFOX3A6NFN3 BCL2-203ENST00000589955 5011 ntBASIC15.66■□□□□ 0.1
RBFOX3A6NFN3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.66■□□□□ 0.1
RBFOX3A6NFN3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RBFOX3A6NFN3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RBFOX3A6NFN3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.66■□□□□ 0.1
RBFOX3A6NFN3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC15.66■□□□□ 0.1
RBFOX3A6NFN3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RBFOX3A6NFN3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RBFOX3A6NFN3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RBFOX3A6NFN3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RBFOX3A6NFN3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RBFOX3A6NFN3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 AC090164.3-201ENST00000610780 2143 ntBASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 DPP3P2-201ENST00000416030 1696 ntBASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 AC010525.1-201ENST00000585559 441 ntBASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.65■□□□□ 0.1
RBFOX3A6NFN3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RBFOX3A6NFN3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RBFOX3A6NFN3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RBFOX3A6NFN3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RBFOX3A6NFN3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RBFOX3A6NFN3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RBFOX3A6NFN3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RBFOX3A6NFN3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RBFOX3A6NFN3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RBFOX3A6NFN3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.64■□□□□ 0.09
RBFOX3A6NFN3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.64■□□□□ 0.09
RBFOX3A6NFN3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.64■□□□□ 0.09
RBFOX3A6NFN3 RARRES2P1-201ENST00000474487 481 ntBASIC15.64■□□□□ 0.09
RBFOX3A6NFN3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15.64■□□□□ 0.09
RBFOX3A6NFN3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.64■□□□□ 0.09
RBFOX3A6NFN3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.64■□□□□ 0.09
RBFOX3A6NFN3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
RBFOX3A6NFN3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RBFOX3A6NFN3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RBFOX3A6NFN3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RBFOX3A6NFN3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RBFOX3A6NFN3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RBFOX3A6NFN3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms