Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.88■■□□□ 1.09
TRIM49BA6NDI0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
TRIM49BA6NDI0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM49BA6NDI0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM49BA6NDI0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM49BA6NDI0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM49BA6NDI0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM49BA6NDI0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM49BA6NDI0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM49BA6NDI0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM49BA6NDI0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.88■■□□□ 1.09
TRIM49BA6NDI0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM49BA6NDI0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM49BA6NDI0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 GPX1P1-201ENST00000388829 606 ntBASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 BX276092.2-201ENST00000417668 665 ntBASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM49BA6NDI0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM49BA6NDI0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.86■■□□□ 1.09
TRIM49BA6NDI0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.86■■□□□ 1.09
TRIM49BA6NDI0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM49BA6NDI0 HLA-G-202ENST00000376815 851 ntBASIC21.86■■□□□ 1.09
TRIM49BA6NDI0 HLA-G-203ENST00000376818 1127 ntBASIC21.86■■□□□ 1.09
TRIM49BA6NDI0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM49BA6NDI0 AC023632.3-201ENST00000521633 145 ntBASIC21.86■■□□□ 1.09
TRIM49BA6NDI0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.86■■□□□ 1.09
TRIM49BA6NDI0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM49BA6NDI0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM49BA6NDI0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM49BA6NDI0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.86■■□□□ 1.09
TRIM49BA6NDI0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
TRIM49BA6NDI0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM49BA6NDI0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
TRIM49BA6NDI0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.85■■□□□ 1.09
TRIM49BA6NDI0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.85■■□□□ 1.09
TRIM49BA6NDI0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM49BA6NDI0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
TRIM49BA6NDI0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM49BA6NDI0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.85■■□□□ 1.09
TRIM49BA6NDI0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM49BA6NDI0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM49BA6NDI0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM49BA6NDI0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM49BA6NDI0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
TRIM49BA6NDI0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM49BA6NDI0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM49BA6NDI0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM49BA6NDI0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.84■■□□□ 1.09
TRIM49BA6NDI0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.84■■□□□ 1.09
TRIM49BA6NDI0 PHGDH-210ENST00000641115 1638 ntBASIC21.84■■□□□ 1.09
TRIM49BA6NDI0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM49BA6NDI0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM49BA6NDI0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.84■■□□□ 1.09
TRIM49BA6NDI0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM49BA6NDI0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM49BA6NDI0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM49BA6NDI0 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.84■■□□□ 1.09
TRIM49BA6NDI0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.84■■□□□ 1.09
TRIM49BA6NDI0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM49BA6NDI0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.84■■□□□ 1.09
TRIM49BA6NDI0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM49BA6NDI0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM49BA6NDI0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM49BA6NDI0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM49BA6NDI0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
TRIM49BA6NDI0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.83■■□□□ 1.09
TRIM49BA6NDI0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM49BA6NDI0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM49BA6NDI0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM49BA6NDI0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM49BA6NDI0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
TRIM49BA6NDI0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM49BA6NDI0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.83■■□□□ 1.09
TRIM49BA6NDI0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
TRIM49BA6NDI0 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.83■■□□□ 1.09
TRIM49BA6NDI0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.83■■□□□ 1.09
TRIM49BA6NDI0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.83■■□□□ 1.09
TRIM49BA6NDI0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.83■■□□□ 1.09
TRIM49BA6NDI0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms