Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.46■□□□□ 0.39
TRDV1A0A1B0GX56 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRDV1A0A1B0GX56 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.46■□□□□ 0.39
TRDV1A0A1B0GX56 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRDV1A0A1B0GX56 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.46■□□□□ 0.39
TRDV1A0A1B0GX56 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRDV1A0A1B0GX56 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.46■□□□□ 0.39
TRDV1A0A1B0GX56 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRDV1A0A1B0GX56 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRDV1A0A1B0GX56 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRDV1A0A1B0GX56 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TRDV1A0A1B0GX56 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRDV1A0A1B0GX56 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
TRDV1A0A1B0GX56 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRDV1A0A1B0GX56 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TRDV1A0A1B0GX56 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 AC079140.4-201ENST00000507448 529 ntBASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRDV1A0A1B0GX56 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRDV1A0A1B0GX56 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 AL136162.1-201ENST00000607711 1078 ntBASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 AL355001.2-201ENST00000620617 1191 ntBASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRDV1A0A1B0GX56 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.42■□□□□ 0.38
TRDV1A0A1B0GX56 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRDV1A0A1B0GX56 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
TRDV1A0A1B0GX56 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.42■□□□□ 0.38
TRDV1A0A1B0GX56 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms