Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 MIR6084-201ENST00000622012 110 ntBASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 KRT16P6-202ENST00000425692 1426 ntBASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV27A0A0K0K1C4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.02□□□□□ -0.16
TRBV27A0A0K0K1C4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV27A0A0K0K1C4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
TRBV27A0A0K0K1C4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV27A0A0K0K1C4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRBV27A0A0K0K1C4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.02□□□□□ -0.16
TRBV27A0A0K0K1C4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV27A0A0K0K1C4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV27A0A0K0K1C4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRBV27A0A0K0K1C4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.02□□□□□ -0.16
TRBV27A0A0K0K1C4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV27A0A0K0K1C4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.02□□□□□ -0.16
TRBV27A0A0K0K1C4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
TRBV27A0A0K0K1C4 KRT8P17-201ENST00000453110 1448 ntBASIC14.02□□□□□ -0.16
TRBV27A0A0K0K1C4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV27A0A0K0K1C4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV27A0A0K0K1C4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV27A0A0K0K1C4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
TRBV27A0A0K0K1C4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.02□□□□□ -0.17
TRBV27A0A0K0K1C4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV27A0A0K0K1C4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.02□□□□□ -0.17
TRBV27A0A0K0K1C4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV27A0A0K0K1C4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV27A0A0K0K1C4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV27A0A0K0K1C4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV27A0A0K0K1C4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.02□□□□□ -0.17
TRBV27A0A0K0K1C4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 PTBP1P-201ENST00000554374 1601 ntBASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 AC027612.3-201ENST00000413684 1047 ntBASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 AL031432.3-201ENST00000607698 485 ntBASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRBV27A0A0K0K1C4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 LINC02228-203ENST00000641970 1355 ntBASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 NEFHP1-201ENST00000412845 2629 ntBASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms