Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC163A0A0D9SF12 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCDC163A0A0D9SF12 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC163A0A0D9SF12 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC163A0A0D9SF12 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC163A0A0D9SF12 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC163A0A0D9SF12 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC163A0A0D9SF12 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.71■□□□□ 0.75
CCDC163A0A0D9SF12 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC163A0A0D9SF12 AP000550.4-202ENST00000639755 178 ntBASIC19.71■□□□□ 0.75
CCDC163A0A0D9SF12 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC163A0A0D9SF12 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
CCDC163A0A0D9SF12 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC163A0A0D9SF12 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CCDC163A0A0D9SF12 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC163A0A0D9SF12 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC163A0A0D9SF12 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC163A0A0D9SF12 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC163A0A0D9SF12 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC163A0A0D9SF12 INGX-201ENST00000359239 846 ntBASIC19.7■□□□□ 0.74
CCDC163A0A0D9SF12 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC163A0A0D9SF12 TSPY5P-201ENST00000426936 936 ntBASIC19.7■□□□□ 0.74
CCDC163A0A0D9SF12 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC163A0A0D9SF12 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC163A0A0D9SF12 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC163A0A0D9SF12 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC163A0A0D9SF12 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC163A0A0D9SF12 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC163A0A0D9SF12 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CCDC163A0A0D9SF12 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC163A0A0D9SF12 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 RCC2P6-201ENST00000526625 1557 ntBASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC163A0A0D9SF12 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 AL049796.1-201ENST00000565336 1766 ntBASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 AC004951.3-201ENST00000418645 1148 ntBASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 FAM207BP-201ENST00000447172 505 ntBASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 COX11P1-201ENST00000489116 835 ntBASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 YBX1P2-201ENST00000489612 999 ntBASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 AL512604.3-201ENST00000569583 964 ntBASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 AC139887.4-201ENST00000607877 719 ntBASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 AC011298.2-201ENST00000617989 482 ntBASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 AL031432.5-201ENST00000641059 760 ntBASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC163A0A0D9SF12 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC163A0A0D9SF12 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC163A0A0D9SF12 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms