Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 MFF-207ENST00000409565 1548 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-1A0A0B4J245 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 AP000997.3-201ENST00000623333 2250 ntBASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 AC090164.3-201ENST00000610780 2143 ntBASIC13.93□□□□□ -0.18
TRAV12-1A0A0B4J245 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 NOC2LP2-201ENST00000407594 1944 ntBASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 GUK1-208ENST00000366728 842 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 ABHD17AP5-201ENST00000580133 923 ntBASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 AC061975.6-201ENST00000579045 1553 ntBASIC13.92□□□□□ -0.18
TRAV12-1A0A0B4J245 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 KRT8P36-201ENST00000489121 1440 ntBASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 AC104581.1-202ENST00000635932 2618 ntBASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 MIR6724-1-201ENST00000616420 92 ntBASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 MIR6724-2-201ENST00000616483 92 ntBASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 MIR6724-4-201ENST00000617390 92 ntBASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 MIR6724-3-201ENST00000622482 92 ntBASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-1A0A0B4J245 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms