Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 NPL-212ENST00000614468 2376 ntTSL 5 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 MAPK10-287ENST00000641217 3037 ntBASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 AL133243.2-201ENST00000610331 1621 ntBASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 CUBNP3-201ENST00000457461 1784 ntBASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 AC002090.1-201ENST00000625000 2138 ntBASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 AL139805.2-201ENST00000455305 2433 ntBASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 CAST-202ENST00000325674 3356 ntTSL 5 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 IFIT1P1-201ENST00000400497 1449 ntBASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 MIR1282-201ENST00000408865 101 ntBASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 RN7SKP240-201ENST00000410583 375 ntBASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 RANP6-201ENST00000413691 644 ntBASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 AL162632.2-201ENST00000553933 399 ntBASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 MIR6071-201ENST00000616741 78 ntBASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 AC011504.1-201ENST00000623331 4103 ntBASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 RAD17P2-201ENST00000451754 1977 ntBASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 AL591848.4-201ENST00000567832 3472 ntBASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 RN7SKP121-201ENST00000410842 305 ntBASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 POU5F1P5-201ENST00000445059 658 ntBASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 RN7SL561P-201ENST00000488553 281 ntBASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 RPL12P7-201ENST00000493832 494 ntBASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 AC063943.2-201ENST00000495697 534 ntBASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 RPL19P11-201ENST00000495944 589 ntBASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 NPM1P27-201ENST00000502784 830 ntBASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 AC112243.1-201ENST00000623949 3851 ntBASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 NEK2P2-201ENST00000438441 1338 ntBASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 MTHFD1P1-201ENST00000413059 2764 ntBASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
KIAA1549Q9HCM3 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms