Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 TCL6_3.1-201ENST00000619064 137 ntBASIC4.91□□□□□ -1.62
AP1S3Q96PC3 U1.31-201ENST00000620022 160 ntBASIC4.91□□□□□ -1.62
AP1S3Q96PC3 AC062022.1-201ENST00000451026 1684 ntBASIC4.91□□□□□ -1.62
AP1S3Q96PC3 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
AP1S3Q96PC3 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
AP1S3Q96PC3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
AP1S3Q96PC3 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
AP1S3Q96PC3 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
AP1S3Q96PC3 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
AP1S3Q96PC3 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
AP1S3Q96PC3 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
AP1S3Q96PC3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
AP1S3Q96PC3 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
AP1S3Q96PC3 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
AP1S3Q96PC3 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC4.9□□□□□ -1.62
AP1S3Q96PC3 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
AP1S3Q96PC3 AC096992.2-201ENST00000609553 1684 ntBASIC4.9□□□□□ -1.62
AP1S3Q96PC3 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.9□□□□□ -1.62
AP1S3Q96PC3 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.62
AP1S3Q96PC3 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
AP1S3Q96PC3 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
AP1S3Q96PC3 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
AP1S3Q96PC3 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
AP1S3Q96PC3 STK3-216ENST00000523601 3107 ntTSL 2 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 LCN1P2-201ENST00000372030 223 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 MIR614-201ENST00000385082 90 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AL049697.3-201ENST00000406493 982 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AL034372.1-201ENST00000407586 754 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 CYCSP17-201ENST00000407870 315 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 PPIL1P1-201ENST00000423936 499 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 CHCHD3P1-201ENST00000425516 676 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 BX119904.3-201ENST00000428194 957 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 RPL21P33-201ENST00000444831 484 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 LYZ-202ENST00000548839 558 ntTSL 2 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 NQO1-205ENST00000561500 891 ntTSL 3 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AC061975.3-201ENST00000583209 244 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AC010487.1-201ENST00000594408 1172 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AC020914.7-201ENST00000594477 545 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AC007262.1-201ENST00000604099 321 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AC004908.1-201ENST00000606572 541 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AL136097.3-201ENST00000611097 505 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AC004241.2-201ENST00000614562 444 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 PART1_3.1-201ENST00000619680 131 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AL078595.2-201ENST00000605309 1780 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AC022613.3-201ENST00000560740 1346 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AL442128.2-201ENST00000620246 1824 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 PPBPP2-201ENST00000513150 1362 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 AC092724.1-201ENST00000624623 3397 ntBASIC4.9□□□□□ -1.63
AP1S3Q96PC3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
AP1S3Q96PC3 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms