Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 HAO2-202ENST00000361035 1668 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LRCH3Q96II8 AC092375.2-201ENST00000567370 1665 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 AC009021.2-201ENST00000567401 1666 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 PPARG-209ENST00000397026 2029 ntTSL 5 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 MARF1-202ENST00000540441 7105 ntTSL 5 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 JAZF1-AS1-202ENST00000444500 3684 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LRCH3Q96II8 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 ROBO1-204ENST00000467549 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LRCH3Q96II8 ZNF304-201ENST00000282286 4202 ntAPPRIS P3 TSL 2 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LRCH3Q96II8 NLRP3-201ENST00000336119 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LRCH3Q96II8 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LRCH3Q96II8 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 Y_RNA.89-201ENST00000363031 102 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 SNORA63C-201ENST00000364578 129 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 RNU6-1122P-201ENST00000384449 107 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LRCH3Q96II8 NCOR1P3-201ENST00000420479 303 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 LINC02088-201ENST00000428134 620 ntTSL 3 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 AC000362.1-201ENST00000433725 425 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 AL512286.1-201ENST00000439244 400 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 AL450263.2-201ENST00000439400 589 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 EIF4A1P6-201ENST00000448133 1210 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 DDX39BP2-208ENST00000453923 258 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 FGF7P4-201ENST00000509595 295 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 AC008837.2-201ENST00000513076 418 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 AC087521.2-203ENST00000530450 593 ntTSL 4 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LRCH3Q96II8 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 ANP32BP1-202ENST00000568553 737 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 AC034268.2-201ENST00000571784 482 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 AC069304.2-201ENST00000605154 435 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 AC006238.1-201ENST00000609787 534 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 AC109454.4-201ENST00000623411 649 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 AC055716.2-201ENST00000552545 2441 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 PPWD1-215ENST00000538977 2055 ntTSL 2 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 AC011330.1-201ENST00000510070 3235 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LRCH3Q96II8 XIST-211ENST00000635841 1734 ntTSL 5 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 SYT2-202ENST00000367268 7598 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LRCH3Q96II8 MTND4P14-201ENST00000435799 1354 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 ZNF702P-201ENST00000270443 2990 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LRCH3Q96II8 HCRTR2-201ENST00000370862 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LRCH3Q96II8 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 NUCB2-208ENST00000529010 2274 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LRCH3Q96II8 AGMO-201ENST00000342526 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LRCH3Q96II8 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LRCH3Q96II8 AC138869.3-201ENST00000563960 2486 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LRCH3Q96II8 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 C14orf2-203ENST00000553430 1659 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LRCH3Q96II8 GLDN-202ENST00000396399 4584 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LRCH3Q96II8 FGA-202ENST00000403106 2248 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LRCH3Q96II8 STEAP3-AS1-201ENST00000454260 3218 ntTSL 2 BASIC9.07□□□□□ -0.96
LRCH3Q96II8 COL21A1-201ENST00000244728 4339 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
LRCH3Q96II8 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC9.06□□□□□ -0.96
LRCH3Q96II8 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC9.06□□□□□ -0.96
LRCH3Q96II8 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
LRCH3Q96II8 AL359715.4-201ENST00000606629 1436 ntBASIC9.06□□□□□ -0.96
LRCH3Q96II8 PART1-202ENST00000506884 2068 ntTSL 2 BASIC9.06□□□□□ -0.96
LRCH3Q96II8 FGF5-201ENST00000312465 4555 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LRCH3Q96II8 AL353743.4-201ENST00000422653 1547 ntBASIC9.06□□□□□ -0.96
LRCH3Q96II8 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LRCH3Q96II8 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LRCH3Q96II8 ADAM3A-208ENST00000495171 2284 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
LRCH3Q96II8 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
LRCH3Q96II8 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
LRCH3Q96II8 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC9.06□□□□□ -0.96
LRCH3Q96II8 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
LRCH3Q96II8 KCNE1-201ENST00000337385 3347 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
LRCH3Q96II8 EGF-206ENST00000509793 4489 ntTSL 2 BASIC9.06□□□□□ -0.96
LRCH3Q96II8 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LRCH3Q96II8 TGIF2LY-201ENST00000321217 905 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LRCH3Q96II8 Y_RNA.132-201ENST00000363421 102 ntBASIC9.06□□□□□ -0.96
LRCH3Q96II8 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
LRCH3Q96II8 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
LRCH3Q96II8 SH3KBP1-203ENST00000379716 3819 ntTSL 2 BASIC9.06□□□□□ -0.96
LRCH3Q96II8 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
LRCH3Q96II8 MIR323B-201ENST00000385269 82 ntBASIC9.06□□□□□ -0.96
LRCH3Q96II8 AL139100.1-201ENST00000408001 498 ntBASIC9.06□□□□□ -0.96
LRCH3Q96II8 SNORD3J-201ENST00000408473 190 ntBASIC9.06□□□□□ -0.96
LRCH3Q96II8 RNU2-17P-201ENST00000410290 190 ntBASIC9.06□□□□□ -0.96
LRCH3Q96II8 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC9.06□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 1598 ms