Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SCXQ7RTU7 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC4.43□□□□□ -1.7
SCXQ7RTU7 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC4.43□□□□□ -1.7
SCXQ7RTU7 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC4.43□□□□□ -1.7
SCXQ7RTU7 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC4.43□□□□□ -1.7
SCXQ7RTU7 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC4.43□□□□□ -1.7
SCXQ7RTU7 EIF4A3P1-201ENST00000578499 647 ntBASIC4.43□□□□□ -1.7
SCXQ7RTU7 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC4.43□□□□□ -1.7
SCXQ7RTU7 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC4.43□□□□□ -1.7
SCXQ7RTU7 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC4.43□□□□□ -1.7
SCXQ7RTU7 AL390877.1-201ENST00000605704 214 ntBASIC4.43□□□□□ -1.7
SCXQ7RTU7 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC4.43□□□□□ -1.7
SCXQ7RTU7 AL137000.1-201ENST00000610528 1244 ntBASIC4.43□□□□□ -1.7
SCXQ7RTU7 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC4.43□□□□□ -1.7
SCXQ7RTU7 AC073857.1-201ENST00000625082 1054 ntBASIC4.43□□□□□ -1.7
SCXQ7RTU7 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC4.43□□□□□ -1.7
SCXQ7RTU7 OFD1P17-201ENST00000437639 3018 ntBASIC4.43□□□□□ -1.7
SCXQ7RTU7 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.43□□□□□ -1.7
SCXQ7RTU7 AL359263.1-201ENST00000441188 2796 ntBASIC4.43□□□□□ -1.7
SCXQ7RTU7 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SCXQ7RTU7 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.43□□□□□ -1.7
SCXQ7RTU7 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC4.43□□□□□ -1.7
SCXQ7RTU7 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCXQ7RTU7 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCXQ7RTU7 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCXQ7RTU7 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCXQ7RTU7 AC005261.2-201ENST00000593427 4258 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SCXQ7RTU7 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 NCOA4P2-201ENST00000340589 1813 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SCXQ7RTU7 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SCXQ7RTU7 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCXQ7RTU7 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 RNA5SP382-201ENST00000363355 112 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 NRIR-201ENST00000366140 799 ntTSL 3 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCXQ7RTU7 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SCXQ7RTU7 ATP5BP1-201ENST00000411980 1574 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SCXQ7RTU7 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SCXQ7RTU7 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 SMARCE1P1-201ENST00000417747 1186 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 AHCYP8-201ENST00000425108 209 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 AC091390.2-201ENST00000432573 374 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 RPS18P1-201ENST00000447840 458 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 PRDX1P1-201ENST00000449329 596 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 NUCKS1P1-201ENST00000452067 703 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 AC004890.1-201ENST00000461005 181 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 RPL34P34-201ENST00000465389 354 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 RN7SL390P-201ENST00000470634 284 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 UOX-201ENST00000471089 899 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 AP003385.3-201ENST00000472498 287 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 RN7SL70P-201ENST00000478322 302 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 RN7SL649P-201ENST00000496974 275 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 AC114324.2-202ENST00000503812 134 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SCXQ7RTU7 MTCYBP44-201ENST00000514835 823 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 AC093878.1-201ENST00000515630 432 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCXQ7RTU7 IGLVV-66-201ENST00000523818 341 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCXQ7RTU7 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 PPIAP6-201ENST00000557078 499 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 HMGN2P47-201ENST00000559378 272 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 OR4C49P-201ENST00000563891 900 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 AC067852.5-201ENST00000589299 310 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 AC137695.1-201ENST00000604126 489 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 AC019257.2-201ENST00000605539 497 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 AC140479.2-201ENST00000421567 3130 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 AP002800.1-201ENST00000624982 2225 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 CCAT2-201ENST00000630920 1752 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SCXQ7RTU7 AC090771.1-201ENST00000585803 1618 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 MKI67P1-201ENST00000604297 1460 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 AL117378.2-201ENST00000622916 1337 ntBASIC4.42□□□□□ -1.7
SCXQ7RTU7 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms